RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PXKQ7Z7A4 578 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 C1orf131Q8NDD1 294 aaKnown RBP5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 ADPRHL1Q8NDY3 354 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 FBXL20Q96IG2 436 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 CLSTN3Q9BQT9 956 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 AIFM2Q9BRQ8 373 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 CLPBQ9H078 707 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 PRKRIP1Q9H875 184 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 TLR8Q9NR97 1041 aaKnown RBP5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 KCND2Q9NZV8 630 aa5.96□□□□□ -1.46
HMGB1P47-201ENST00000511281 PEX1O43933 1283 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 TIPRLO75663 272 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 KAT7O95251 611 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 CHRM2P08172 466 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 ITGAMP11215 1152 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 PRPH2P23942 346 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 PRKCHP24723 683 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 AVPR2P30518 371 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 PTGS2P35354 604 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 TXKP42681 527 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 RPS6KA3P51812 740 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 PDE1AP54750 535 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 GOLGA8FQ08AF8 430 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 GPR162Q16538 588 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 ERCC6LQ2NKX8 1250 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 RUNDC3AQ59EK9 446 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 ZNF585AQ6P3V2 769 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCDC129Q6ZRS4 1044 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 GALNT7Q86SF2 657 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 SCN4BQ8IWT1 228 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 LSMEM1Q8N8F7 131 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 EXD3Q8N9H8 876 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 TNIP2Q8NFZ5 429 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 METTL6Q8TCB7 284 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 CACTINQ8WUQ7 758 aaKnown RBP5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 ITPAQ9BY32 194 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 NKIRAS2Q9NYR9 191 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 SARDHQ9UL12 918 aa5.95□□□□□ -1.46
HMGB1P47-201ENST00000511281 NPIPB15A6NHN6 443 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 TMEM232C9JQI7 657 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 NR2F6P10588 404 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 PEPDP12955 493 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 TM4SF1P30408 202 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 CXCR5P32302 372 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 SLC8A1P32418 973 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 HOXD12P35452 270 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 BSGP35613 385 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 HNF1BP35680 557 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 MLH1P40692 756 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 MTNR1AP48039 350 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 CDH15P55291 814 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 MAMLD1Q13495 774 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ALKBH1Q13686 389 aaKnown RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ACVR2BQ13705 512 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 SEMA3AQ14563 771 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 RNASE12Q5GAN4 147 aaKnown RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 PDXDC1Q6P996 788 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 GJB7Q6PEY0 223 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ATF7IPQ6VMQ6 1270 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ADGRG6Q86SQ4 1221 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 C1orf210Q8IVY1 113 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCDC105Q8IYK2 499 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ADGRF3Q8IZF5 1079 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ETNPPLQ8TBG4 499 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ZNF845Q96IR2 970 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 Q96MF0 132 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 C5orf34Q96MH7 638 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 CDK5RAP1Q96SZ6 601 aaKnown RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 SDF4Q9BRK5 362 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 SLC25A18Q9H1K4 315 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 MROH8Q9H579 483 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 SFXN1Q9H9B4 322 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 VEZTQ9HBM0 779 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 PLSCR4Q9NRQ2 329 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 DIAPH3Q9NSV4 1193 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ALKBH4Q9NXW9 302 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 BCCIPQ9P287 314 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 KLQ9UEF7 1012 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 TBC1D29Q9UFV1 150 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 TESQ9UGI8 421 aaKnown RBP5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ST6GALNAC2Q9UJ37 374 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 VPS28Q9UK41 221 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 ADAMTS5Q9UNA0 930 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 PSAT1Q9Y617 370 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 PIAS3Q9Y6X2 628 aa5.94□□□□□ -1.46
HMGB1P47-201ENST00000511281 A0A0G2JLL6 359 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCDC151A5D8V7 595 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 H0YIZ8 118 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 TCERG1O14776 1098 aaKnown RBP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 PLOD3O60568 738 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 CCNDBP1O95273 360 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 NPSP0C0P6 89 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 APEHP13798 732 aaKnown RBP5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 MAPK4P31152 587 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 GJC1P36383 396 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 RGS2P41220 211 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 AGTR2P50052 363 aa5.93□□□□□ -1.46
HMGB1P47-201ENST00000511281 MPP3Q13368 585 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms