RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 WFIKKN2Q8TEU8 576 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 GAB3Q8WWW8 586 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 PGAP3Q96FM1 320 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 LMLNQ96KR4 655 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 RPRD1AQ96P16 312 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 HINFPQ9BQA5 517 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 SLC6A17Q9H1V8 727 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 THAP10Q9P2Z0 257 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 CAPN11Q9UMQ6 739 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 EML5Q05BV3 1969 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 CCDC163A0A0D9SF12 145 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 TCRBV5S1A1TA0A578 114 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 SIGLEC16A6NMB1 481 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 CBFA2T2O43439 604 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 TIMM44O43615 452 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 TPM3P06753 285 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 PLEKP08567 350 aaPredicted RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 HLA-EP13747 358 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 GABRG2P18507 467 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 POLR2EP19388 210 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 GPD1P21695 349 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 GSCP56915 257 aaPredicted RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 ZBED6P86452 979 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 EIF4HQ15056 248 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 FNDC3BQ53EP0 1204 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 TDRD12Q587J7 1177 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 RABGAP1LQ5R372 815 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 WDR59Q6PJI9 974 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 ARCQ7LC44 396 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 KIAA0907Q7Z7F0 614 aaPredicted RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 KBTBD6Q86V97 674 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 ZNF366Q8N895 744 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 RLN3Q8WXF3 142 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 MCEEQ96PE7 176 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 GABRG3Q99928 467 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.43□□□□□ -0.1
DDX41-212ENST00000511040 INTS6Q9UL03 887 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 RAB23Q9ULC3 237 aa14.43□□□□□ -0.1
DDX41-212ENST00000511040 LUC7L2Q9Y383 392 aaKnown RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 ZFHX2Q9C0A1 2572 aaPredicted RBP14.43□□□□□ -0.1
DDX41-212ENST00000511040 ITIH6Q6UXX5 1313 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 CNTN5O94779 1100 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 FTLP02792 175 aaPredicted RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 CASP14P31944 242 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 CNR2P34972 360 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 CSKP41240 450 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 CTSOP43234 321 aaPredicted RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 RPL7AP62424 266 aaKnown RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 PTPRNQ16849 979 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 PITRM1Q5JRX3 1037 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 BNIPLQ7Z465 357 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 APCDD1Q8J025 514 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 FAM160A2Q8N612 972 aaPredicted RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 FAM172AQ8WUF8 416 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 KIAA1522Q9P206 1035 aaPredicted RBP14.42□□□□□ -0.1
DDX41-212ENST00000511040 NCDNQ9UBB6 729 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 PAXBP1Q9Y5B6 917 aa14.42□□□□□ -0.1
DDX41-212ENST00000511040 A0A1B0GVM2 712 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 TCAF2A6NFQ2 919 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 ZBTB24O43167 697 aaPredicted RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 CCP110O43303 1012 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 SYNCRIPO60506 623 aaKnown RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 ENDOD1O94919 500 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 NDUFV2P19404 249 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 BCKDHBP21953 392 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 MZF1P28698 734 aaPredicted RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 PTPN9P43378 593 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 HDAC4P56524 1084 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 OGDHQ02218 1023 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 MAMLD1Q13495 774 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 STARD3Q14849 445 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 USP39Q53GS9 565 aaKnown RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 ALFQ53S48 1182 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 PPP1R15BQ5SWA1 713 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 CXorf57Q6NSI4 855 aaKnown RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 DCUN1D2Q6PH85 259 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 KIAA1324Q6UXG2 1013 aaKnown RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 CACUL1Q86Y37 369 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 ZNF683Q8IZ20 524 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 CCDC185Q8N715 623 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 ZNF557Q8N988 423 aaPredicted RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 OR52K2Q8NGK3 314 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 SYN2Q92777 582 aaPredicted RBP14.41□□□□□ -0.1
DDX41-212ENST00000511040 MAGEB5Q9BZ81 275 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 MTG2Q9H4K7 406 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 CD248Q9HCU0 757 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 MPP6Q9NZW5 540 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 PLA2G4CQ9UP65 541 aa14.41□□□□□ -0.1
DDX41-212ENST00000511040 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.41□□□□□ -0.12e-7■■■□□ 14.7
DDX41-212ENST00000511040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.4□□□□□ -0.1
DDX41-212ENST00000511040 ANKRD62A6NC57 917 aa14.4□□□□□ -0.1
DDX41-212ENST00000511040 E9PAM4 449 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms