RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 PTPRDP23468 1912 aa17.02■□□□□ 0.32
CLMAT3-201ENST00000510576 CEP350Q5VT06 3117 aa17.02■□□□□ 0.32
CLMAT3-201ENST00000510576 I6L893 689 aaPredicted RBP17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 KCNK1O00180 336 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 ZNF623O75123 536 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 POMCP01189 267 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 MX2P20592 715 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 PTPN3P26045 913 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 RASSF2P50749 326 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 PPIDQ08752 370 aaKnown RBP17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 INTS6LQ5JSJ4 861 aaKnown RBP17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 CCDC91Q7Z6B0 441 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 UNC5BQ8IZJ1 945 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 ACBD6Q9BR61 282 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 TMEM120AQ9BXJ8 343 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 WDCPQ9H6R7 721 aa17.02■□□□□ 0.31
CLMAT3-201ENST00000510576 MTSS1O43312 755 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 MGEA5O60502 916 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 B3GAT3O94766 335 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 AMHP03971 560 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 CXCR3P49682 368 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 FCGRTP55899 365 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 ZNF449Q6P9G9 518 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 PACS1Q6VY07 963 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 CLNKQ7Z7G1 428 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 E2F7Q96AV8 911 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 MECRQ9BV79 373 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 SAR1AQ9NR31 198 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 DSEQ9UL01 958 aa17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
CLMAT3-201ENST00000510576 SEPT4O43236 478 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 CYP11A1P05108 521 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 POLBP06746 335 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 BDNFP23560 247 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SERPINB6P35237 376 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 BRCC3P46736 316 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 TMPRSS15P98073 1019 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SREBF2Q12772 1141 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 GRIK3Q13003 919 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 PAN2Q504Q3 1202 aaKnown RBP17■□□□□ 0.31
CLMAT3-201ENST00000510576 SPANXN3Q5MJ09 141 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 FAM171BQ6P995 826 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 RASSF3Q86WH2 238 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 NUDCD3Q8IVD9 361 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 NPWQ8N729 165 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 RAB3IL1Q8TBN0 382 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 ACMSDQ8TDX5 336 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 HDAC11Q96DB2 347 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 TMEM237Q96Q45 408 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 TKTL2Q9H0I9 626 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 DMAP1Q9NPF5 467 aaPredicted RBP17■□□□□ 0.31
CLMAT3-201ENST00000510576 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SIRPGQ9P1W8 387 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 HEY2Q9UBP5 337 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 NLRC5Q86WI3 1866 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 HNRNPCL1O60812 293 aaKnown RBP17■□□□□ 0.31
CLMAT3-201ENST00000510576 CBX6O95503 412 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 AP2A1O95782 977 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 T-ENOLP0DO92 83 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 NKX3-2P78367 333 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 GALNT2Q10471 571 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 CHI3L2Q15782 390 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 PM20D1Q6GTS8 502 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 TAC4Q86UU9 113 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 CEP57Q86XR8 500 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SCML4Q8N228 414 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 STKLD1Q8NE28 680 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 RNF34Q969K3 372 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 C7orf26Q96N11 449 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 TRIM62Q9BVG3 475 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SLC17A6Q9P2U8 582 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 GABRQQ9UN88 632 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 SNX10Q9Y5X0 201 aa17■□□□□ 0.31
CLMAT3-201ENST00000510576 BIRC5O15392 142 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 HAUS5O94927 633 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 DLDP09622 509 aaKnown RBP16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 PAX3P23760 479 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 EPHB2P29323 1055 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 GTF2A1P52655 376 aaPredicted RBP16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 ZBTB16Q05516 673 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 BST1Q10588 318 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 DSC3Q14574 896 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 KYAT3Q6YP21 454 aaKnown RBP16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 OR52K1Q8NGK4 314 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 HASPINQ8TF76 798 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 AGAP3Q96P47 875 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 GBA3Q9H227 469 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 KCNK13Q9HB14 408 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 TXNDC16Q9P2K2 825 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 OR12D3Q9UGF7 316 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 TRHDEQ9UKU6 1024 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 INPP5FQ9Y2H2 1132 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 NUP205Q92621 2012 aa16.99■□□□□ 0.31
CLMAT3-201ENST00000510576 A0A0U1RQF3 1178 aa16.98■□□□□ 0.31
CLMAT3-201ENST00000510576 CCDC195A0A1B0GUA6 201 aa16.98■□□□□ 0.31
CLMAT3-201ENST00000510576 A8MUI8 341 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms