RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SEMA5AQ13591 1074 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 PPP2R5DQ14738 602 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
PHF3-209ENST00000509330 LVRNQ6Q4G3 990 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 TDRPQ86YL5 185 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
PHF3-209ENST00000509330 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.29■□□□□ 0.04
PHF3-209ENST00000509330 TOP3BO95985 862 aaKnown RBP15.29■□□□□ 0.04
PHF3-209ENST00000509330 MT-ND3P03897 115 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 PYGBP11216 843 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 TPH1P17752 444 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 MAP2K2P36507 400 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 SCAPQ12770 1279 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 PLEKHG4Q58EX7 1191 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 RNF19BQ6ZMZ0 732 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
PHF3-209ENST00000509330 DCP1BQ8IZD4 617 aaKnown RBP15.29■□□□□ 0.04
PHF3-209ENST00000509330 OTUD6BQ8N6M0 293 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 DNAAF3Q8N9W5 541 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 TCP10LQ8TDR4 215 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 CKAP2Q8WWK9 683 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 HIPK3Q9H422 1215 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 VANGL2Q9ULK5 521 aa15.29■□□□□ 0.04
PHF3-209ENST00000509330 HACD1B0YJ81 288 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 TRIM49D1C9J1S8 452 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 SMAPO00193 183 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 OAZ2O95190 189 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 DUSP4Q13115 394 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 OTOP3Q7RTS5 596 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 IRGQQ8WZA9 623 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 PGAP3Q96FM1 320 aaPredicted RBP15.28■□□□□ 0.04
PHF3-209ENST00000509330 ATXN7L3BQ96GX2 97 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 EBNA1BP2Q99848 306 aaKnown RBP15.28■□□□□ 0.04
PHF3-209ENST00000509330 SLC13A1Q9BZW2 595 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 ATP9BO43861 1147 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 NFKB1P19838 968 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 GLUD2P49448 558 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 CDK7P50613 346 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 FUT10Q6P4F1 479 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
PHF3-209ENST00000509330 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 TTC16Q8NEE8 873 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 SEPT8Q92599 483 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 FERMT1Q9BQL6 677 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 PCDHB5Q9Y5E4 795 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 SCN5AQ14524 2016 aa15.28■□□□□ 0.04
PHF3-209ENST00000509330 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 ADAM12O43184 909 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 APOEP02649 317 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CCR1P32246 355 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 GARSP41250 739 aaKnown RBP15.27■□□□□ 0.04
PHF3-209ENST00000509330 ABCG1P45844 678 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 PSMD5Q16401 504 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 LRRC6Q86X45 466 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 ZNF354CQ86Y25 554 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CCDC197Q8NCU1 140 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 SPATA22Q8NHS9 363 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 STAMBPL1Q96FJ0 436 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 GOLGA8TH3BQL2 631 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 OPHN1O60890 802 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 TPSB2P20231 275 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CD68P34810 354 aaPredicted RBP15.27■□□□□ 0.04
PHF3-209ENST00000509330 GMPRP36959 345 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 TUBP50607 506 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 IL9RQ01113 521 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 TPSAB1Q15661 275 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 ZNF280DQ6N043 979 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CIR1Q86X95 450 aaPredicted RBP15.27■□□□□ 0.04
PHF3-209ENST00000509330 MZB1Q8WU39 189 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 FBXO32Q969P5 355 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CFHR5Q9BXR6 569 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 CDY1Q9Y6F8 540 aa15.27■□□□□ 0.04
PHF3-209ENST00000509330 DNM1LO00429 736 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 TYROBPO43914 113 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 ASMTLO95671 621 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 IRX4P78413 519 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 PDZD4Q76G19 769 aaPredicted RBP15.27■□□□□ 0.03
PHF3-209ENST00000509330 DIS3LQ8TF46 1054 aaKnown RBP15.27■□□□□ 0.03
PHF3-209ENST00000509330 TTC17Q96AE7 1141 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 DHRS4Q9BTZ2 278 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 HS3ST4Q9Y661 456 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 BPTFQ12830 3046 aa15.27■□□□□ 0.03
PHF3-209ENST00000509330 ARHGAP42A6NI28 874 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 LPXNO60711 386 aa15.26■□□□□ 0.03
PHF3-209ENST00000509330 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
PHF3-209ENST00000509330 TAC1P20366 129 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms