RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CHST9Q7L1S5 443 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 FAM131BQ86XD5 332 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 C3orf20Q8ND61 904 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 FIBINQ8TAL6 211 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 TKTL2Q9H0I9 626 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 RRN3Q9NYV6 651 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 STAP1Q9ULZ2 295 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 INVSQ9Y283 1065 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 DCHS1Q96JQ0 3298 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 THADAQ6YHU6 1953 aa18.79■□□□□ 0.6
CLDND1-220ENST00000508902 ITIH6Q6UXX5 1313 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 TCRBV21S2A2A0A5A6 115 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 TMCO5BA8MYB1 307 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CNTN5O94779 1100 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 BCKDHBP21953 392 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 GBP1P32455 592 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 DGKEP52429 567 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 HDAC4P56524 1084 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 ATP11AP98196 1134 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 PREPLQ4J6C6 727 aaPredicted RBP18.78■□□□□ 0.6
CLDND1-220ENST00000508902 ALFQ53S48 1182 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 WDR59Q6PJI9 974 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 MFN1Q8IWA4 741 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CHPFQ8IZ52 775 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CARNMT1Q8N4J0 409 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 ZNF366Q8N895 744 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 MSANTD4Q8NCY6 345 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CCDC26Q8TAB7 109 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 GAB3Q8WWW8 586 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CENPIQ92674 756 aaPredicted RBP18.78■□□□□ 0.6
CLDND1-220ENST00000508902 TRIM7Q9C029 511 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 CIPCQ9C0C6 399 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 SEMA4AQ9H3S1 761 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 ZNF212Q9UDV6 495 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 VANGL2Q9ULK5 521 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 GON4LQ3T8J9 2241 aa18.78■□□□□ 0.6
CLDND1-220ENST00000508902 NUMA1Q14980 2115 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CEP192Q8TEP8 1941 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 F5H5T6 163 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CALB1P05937 261 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 SLC2A3P11169 496 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 HLA-EP13747 358 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 NDUFV2P19404 249 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 ABCB4P21439 1286 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 TNFAIP3P21580 790 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 TGM1P22735 817 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 RDXP35241 583 aaKnown RBP18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CTSOP43234 321 aaPredicted RBP18.77■□□□□ 0.6
CLDND1-220ENST00000508902 PTPN9P43378 593 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 ZNF252P-AS1Q0IIN9 211 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 EIF4HQ15056 248 aaKnown RBP18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CDO1Q16878 200 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 BRMS1LQ5PSV4 323 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 MBLAC2Q68D91 279 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 KBTBD6Q86V97 674 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 GAS2L3Q86XJ1 694 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 APCDD1Q8J025 514 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CCAR2Q8N163 923 aaKnown RBP18.77■□□□□ 0.6
CLDND1-220ENST00000508902 CPLX3Q8WVH0 158 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 HMGB4Q8WW32 186 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 RLN3Q8WXF3 142 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 RNF34Q969K3 372 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 ALG14Q96F25 216 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 MRGPRX3Q96LB0 322 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 TMEM245Q9H330 911 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 NENFQ9UMX5 172 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 NUP205Q92621 2012 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 DNAH14Q0VDD8 3507 aa18.77■□□□□ 0.6
CLDND1-220ENST00000508902 RALGAPA1Q6GYQ0 2036 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 SIGLEC16A6NMB1 481 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 CCP110O43303 1012 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 RPP40O75818 363 aaKnown RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 KRT3P12035 628 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 PDGFRAP16234 1089 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 MZF1P28698 734 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 CASP14P31944 242 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 ZBED6P86452 979 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 SIM2Q14190 667 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 MAP7D1Q3KQU3 841 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 PITRM1Q5JRX3 1037 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 AHI1Q8N157 1196 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 FAM160A2Q8N612 972 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 CCDC185Q8N715 623 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 WFIKKN2Q8TEU8 576 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 MCEEQ96PE7 176 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 DDX50Q9BQ39 737 aaKnown RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 SIK2Q9H0K1 926 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 MTG2Q9H4K7 406 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 WDCPQ9H6R7 721 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 PARD6AQ9NPB6 346 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 ARHGAP20Q9P2F6 1191 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 MBD1Q9UIS9 605 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-220ENST00000508902 OR51B4Q9Y5P0 310 aa18.76■□□□□ 0.59
CLDND1-220ENST00000508902 IGLV3-10A0A075B6K4 115 aa18.75■□□□□ 0.59
CLDND1-220ENST00000508902 FAM72CH0Y354 149 aa18.75■□□□□ 0.59
CLDND1-220ENST00000508902 CSKP41240 450 aa18.75■□□□□ 0.59
CLDND1-220ENST00000508902 COPAP53621 1224 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms