RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 IGSF21Q96ID5 467 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 SPATA17Q96L03 361 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 HAPLN3Q96S86 360 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 LGMNQ99538 433 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CCDC77Q9BR77 488 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CAPS2Q9BXY5 557 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 KLC2Q9H0B6 622 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 STMN4Q9H169 189 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ETNK1Q9HBU6 452 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 OSER1Q9NX31 292 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 OR12D3Q9UGF7 316 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 SFMBT1Q9UHJ3 866 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 SNX10Q9Y5X0 201 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 BACE2Q9Y5Z0 518 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TDRD15B5MCY1 1934 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TTC3P53804 2025 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TSC2P49815 1807 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 LTBP2Q14767 1821 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 A0A0A0MRY4 1105 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SMIM23A6NLE4 172 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 E7EVH7 732 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PPP1R12AO14974 1030 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 KIAA0355O15063 1070 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 NCAM2O15394 837 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ADAM12O43184 909 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SHOX2O60902 331 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PAGE1O75459 146 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SOAT2O75908 522 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 LRIG2O94898 1065 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 METTL18O95568 372 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 IVLP07476 585 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TSHRP16473 764 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TPSB2P20231 275 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 MX2P20592 715 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 HPDP32754 393 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ATP1A2P50993 1020 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PPP2R2AP63151 447 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 IFI35P80217 286 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 AP1B1Q10567 949 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FASTKD3Q14CZ7 662 aaKnown RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TPSAB1Q15661 275 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 LONRF1Q17RB8 773 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SKIDA1Q1XH10 827 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 BBS9Q3SYG4 887 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 MGAT5BQ3V5L5 792 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 MSS51Q4VC12 460 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ANKRD20A2Q5SQ80 823 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 HP1BP3Q5SSJ5 553 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FAM182AQ5T1J6 154 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ANKRD20A1Q5TYW2 823 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ANKRD20A3Q5VUR7 823 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PRSS55Q6UWB4 352 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ARHGEF18Q6ZSZ5 1173 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 CCDC13Q8IYE1 715 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 RNF168Q8IYW5 571 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TTC9BQ8N6N2 239 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 NETO2Q8NC67 525 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 CCNYQ8ND76 341 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 MCUQ8NE86 351 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PYROXD1Q8WU10 500 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ATXN2LQ8WWM7 1075 aaKnown RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FBXO32Q969P5 355 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 ZNF689Q96CS4 500 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 P2RY11Q96G91 374 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FAM161BQ96MY7 647 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SPATA13Q96N96 652 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SERPINB11Q96P15 392 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 SEPT5Q99719 369 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FERMT1Q9BQL6 677 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 VN1R3Q9BXE9 311 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 FRMD8Q9BZ67 464 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 BRD8Q9H0E9 1235 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 PRDM12Q9H4Q4 367 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 CLIC5Q9NZA1 410 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 GMIPQ9P107 970 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 MTRRQ9UBK8 725 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 CDY1Q9Y6F8 540 aa8.19□□□□□ -1.1
NR1I3-226ENST00000508740 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.19□□□□□ -1.1
NR1I3-226ENST00000508740 TRIM43BA6NCK2 446 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 MSI1O43347 362 aaKnown RBP8.18□□□□□ -1.1
NR1I3-226ENST00000508740 OPHN1O60890 802 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 EFCAB14O75071 495 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 BANF1O75531 89 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 STK10O94804 968 aaKnown RBP8.18□□□□□ -1.1
NR1I3-226ENST00000508740 ZDHHC11BP0C7U3 371 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 SRGAP2BP0DMP2 458 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 SLC2A3P11169 496 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 ITGB8P26012 769 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 EPHB2P29323 1055 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 HTR7P34969 479 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 SERPINB6P35237 376 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 FDFT1P37268 417 aa8.18□□□□□ -1.1
NR1I3-226ENST00000508740 MDH1P40925 334 aaKnown RBP8.18□□□□□ -1.1
NR1I3-226ENST00000508740 TUFMP49411 452 aaKnown RBP8.18□□□□□ -1.1
NR1I3-226ENST00000508740 IRAK1P51617 712 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms