RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CYS1Q717R9 158 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 PYROXD2Q8N2H3 581 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 RFWD2Q8NHY2 731 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 DNAJC9Q8WXX5 260 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 KCTD13Q8WZ19 329 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 TMEM209Q96SK2 561 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 TMEM120AQ9BXJ8 343 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 MTMR10Q9NXD2 777 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 KANSL3Q9P2N6 904 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 TCRBV7S3A2A0A539 114 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 F8W8V4 182 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 BIRC5O15392 142 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 MAGEC1O60732 1142 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZFXP17010 805 aaPredicted RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CNTFP26441 200 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 L1CAMP32004 1257 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CCNFP41002 786 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SULT1E1P49888 294 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 MTM1Q13496 603 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 LBRQ14739 615 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CCDC6Q16204 474 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 DPYSL2Q16555 572 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZNF280BQ86YH2 543 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CCDC33Q8N5R6 958 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 PPFIBP2Q8ND30 876 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 OR10T2Q8NGX3 314 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 MYLPFQ96A32 169 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 OXNAD1Q96HP4 312 aaPredicted RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZNF333Q96JL9 665 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZNF670Q9BS34 389 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ULBP1Q9BZM6 244 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 KCNK13Q9HB14 408 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 TMLHEQ9NVH6 421 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CDH9Q9ULB4 789 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 C9IYK1 514 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 GOLGA8RI6L899 631 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 APOL1O14791 398 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 DAB1O75553 588 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 FYNP06241 537 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 PYGBP11216 843 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SKIP12755 728 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CYP2F1P24903 491 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 PCSK1P29120 753 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 RAP1GDS1P52306 607 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 BCAR1P56945 870 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 OCRLQ01968 901 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 NME3Q13232 169 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SYCP2LQ5T4T6 812 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 STXBP5Q5T5C0 1151 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 C6orf163Q5TEZ5 329 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC9A4Q6AI14 798 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 STRADAQ7RTN6 431 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 TMPRSS6Q8IU80 811 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 CCDC110Q8TBZ0 833 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 RSPH1Q8WYR4 309 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 STMN2Q93045 179 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 TTC17Q96AE7 1141 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SPDL1Q96EA4 605 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SERAC1Q96JX3 654 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 FAM111AQ96PZ2 611 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SRPK1Q96SB4 655 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 KCTD15Q96SI1 283 aaPredicted RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 TSEN34Q9BSV6 310 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 WWP1Q9H0M0 922 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 PRDM16Q9HAZ2 1276 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 USP29Q9HBJ7 922 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 ZC3H7BQ9UGR2 993 aaKnown RBP11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 PLLPQ9Y342 182 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 SQORQ9Y6N5 450 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
SH3RF1-203ENST00000508685 M0QYT0 321 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 M0QZQ0 153 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 NVLO15381 856 aaKnown RBP11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 DDHD2O94830 711 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 GOT1P17174 413 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 GM2AP17900 193 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 BDNFP23560 247 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 SERPINB3P29508 390 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 SARNPP82979 210 aaKnown RBP11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 GBE1Q04446 702 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 SLC34A1Q06495 639 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 OVGP1Q12889 678 aa11.32□□□□□ -0.6
SH3RF1-203ENST00000508685 MUM1Q2TAK8 710 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms