RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C1orf220Q5T0J3 134 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 MPP7Q5T2T1 576 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 ARHGAP40Q5TG30 622 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 ZNF557Q8N988 423 aaPredicted RBP9.78□□□□□ -0.84
NEDD9-211ENST00000508546 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 OR2T34Q8NGX1 318 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 MYO19Q96H55 970 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 NIF3L1Q9GZT8 377 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 UPF2Q9HAU5 1272 aaKnown RBP9.78□□□□□ -0.84
NEDD9-211ENST00000508546 APOBEC3GQ9HC16 384 aaKnown RBP9.78□□□□□ -0.84
NEDD9-211ENST00000508546 AASDHPPTQ9NRN7 309 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 SERGEFQ9UGK8 458 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 FZD4Q9ULV1 537 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 SRPK3Q9UPE1 567 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 CLCA2Q9UQC9 943 aa9.78□□□□□ -0.84
NEDD9-211ENST00000508546 TLN1Q9Y490 2541 aaKnown RBP9.78□□□□□ -0.84
NEDD9-211ENST00000508546 MAPK13O15264 365 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 RNASEH1O60930 286 aaKnown RBP9.77□□□□□ -0.85
NEDD9-211ENST00000508546 UCNP55089 124 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 TMPRSS3P57727 454 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 NXPH1P58417 271 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 INSM1Q01101 510 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-211ENST00000508546 BNIP3Q12983 259 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 STK38Q15208 465 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 CST6Q15828 149 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 HNRNPA1L2Q32P51 320 aaKnown RBP9.77□□□□□ -0.85
NEDD9-211ENST00000508546 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 BHLHA9Q7RTU4 235 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 PIGZQ86VD9 579 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 TTC39CQ8N584 583 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 KDM1BQ8NB78 822 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF248Q8NDW4 579 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 WFDC5Q8TCV5 224 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 GANCQ8TET4 914 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 LMLNQ96KR4 655 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 LGMNQ99538 433 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 NEUROG2Q9H2A3 272 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 KCTD10Q9H3F6 313 aa9.77□□□□□ -0.85
NEDD9-211ENST00000508546 ZSCAN16Q9H4T2 348 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-211ENST00000508546 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
NEDD9-211ENST00000508546 KIF26BQ2KJY2 2108 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 A0A1W2PP55 124 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 TLR4O00206 839 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 PDXKO00764 312 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 WNT9AO14904 365 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SPTLC2O15270 562 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 MID1O15344 667 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 LATO43561 262 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SIN3BO75182 1162 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 DXOO77932 396 aaKnown RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ZBED1O96006 694 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 NR3C1P04150 777 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ASLP04424 464 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 CD58P19256 250 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 CASP1P29466 404 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 CD70P32970 193 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SGSHP51688 502 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 TKTL1P51854 596 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 PCBP4P57723 403 aaKnown RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ST8SIA6P61647 398 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 E2F1Q01094 437 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 PROX2Q3B8N5 592 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 C9orf64Q5T6V5 341 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 PIK3R6Q5UE93 754 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 BROXQ5VW32 411 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ARHGAP17Q68EM7 881 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SHC4Q6S5L8 630 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF574Q6ZN55 896 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 IQCHQ86VS3 1027 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SNRNP27Q8WVK2 155 aaKnown RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 NAF1Q96HR8 494 aaKnown RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 HIC2Q96JB3 615 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SERAC1Q96JX3 654 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 HEXIM2Q96MH2 286 aaKnown RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 ZNF578Q96N58 590 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-211ENST00000508546 BLZF1Q9H2G9 400 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 MTG2Q9H4K7 406 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 SFMBT1Q9UHJ3 866 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 PAXBP1Q9Y5B6 917 aa9.76□□□□□ -0.85
NEDD9-211ENST00000508546 RP1P56715 2156 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 FBN2P35556 2912 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 TARSL2A2RTX5 802 aaKnown RBP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 POLR2DO15514 142 aaKnown RBP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 IRAK2O43187 625 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 CUTAO60888 179 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 RNASEH2AO75792 299 aaKnown RBP9.75□□□□□ -0.85
NEDD9-211ENST00000508546 MT-CO3P00414 261 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 IGLV3-27P01718 113 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 GOT1P17174 413 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 SLC8A1P32418 973 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 NUDT1P36639 197 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 CCR10P46092 362 aa9.75□□□□□ -0.85
NEDD9-211ENST00000508546 VAMP7P51809 220 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms