RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 BMP1P13497 986 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 GLULP15104 373 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 RHOQP17081 205 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 TCP1P17987 556 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 TACR2P21452 398 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SLC6A4P31645 630 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 ARL4AP40617 200 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 VIPR2P41587 438 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 CDKN2BP42772 138 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 CDH4P55283 916 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 GNG11P61952 73 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 ZP2Q05996 745 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SLC12A1Q13621 1099 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 DPYSQ14117 519 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 MPPE1Q53F39 396 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 RABGAP1LQ5R372 815 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 DAB2IPQ5VWQ8 1189 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SLC9A4Q6AI14 798 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 FBXL22Q6P050 247 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 C1orf228Q6PIY5 440 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 LRRC31Q6UY01 552 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SETD3Q86TU7 594 aaPredicted RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 NLRP14Q86W24 1093 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 CPNE8Q86YQ8 564 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SLC35F6Q8N357 371 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 HJURPQ8NCD3 748 aaPredicted RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 PPM1EQ8WY54 764 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 KRT35Q92764 455 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 IRF7Q92985 503 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 MSANTD3Q96H12 275 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 WDR24Q96S15 920 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 TRMT61BQ9BVS5 477 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 ZYG11BQ9C0D3 744 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SMG9Q9H0W8 520 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 CATSPERBQ9H7T0 1116 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 KCNK12Q9HB15 430 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SLC2A4RGQ9NR83 387 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SPHK2Q9NRA0 654 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 TMEM248Q9NWD8 314 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 CWC15Q9P013 229 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 RNF14Q9UBS8 474 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 XPO7Q9UIA9 1087 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 FBXO10Q9UK96 956 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 SNX12Q9UMY4 172 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 TBC1D30Q9Y2I9 924 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 RAD54BQ9Y620 910 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 NUMBLQ9Y6R0 609 aa8.91□□□□□ -0.98
USP46-207ENST00000508499 NYNRINQ9P2P1 1898 aaKnown RBP8.91□□□□□ -0.98
USP46-207ENST00000508499 TYW5A2RUC4 315 aaKnown RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 CTAGE9A4FU28 777 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 TMEM110-MUSTN1A8MSY1 372 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ESPNB1AK53 854 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FAM72CH0Y354 149 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 H3BRJ5 948 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FANCGO15287 622 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 CACNG3O60359 315 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ADH1CP00326 375 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 IL9P15248 144 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ZFXP17010 805 aaPredicted RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 CETN2P41208 172 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 MARCKSL1P49006 195 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 NR2C2P49116 596 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 MAPKAPK2P49137 400 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 CDH6P55285 790 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 OXCT1P55809 520 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 AMPD2Q01433 879 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 TFF2Q03403 129 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ZNF33AQ06730 810 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 KLF1Q13351 362 aaPredicted RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 TUBB2AQ13885 445 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 PAFAH1B3Q15102 231 aaKnown RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 CA9Q16790 459 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 SMTNL2Q2TAL5 461 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ATP13A4Q4VNC1 1196 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 ANKRD20A8PQ5CZ79 823 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 KCNT1Q5JUK3 1230 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FAM72AQ5TYM5 149 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 DCAF12L1Q5VU92 463 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FYB2Q5VWT5 728 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FAM72DQ6L9T8 149 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 RHBDF2Q6PJF5 856 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 RFX8Q6ZV50 586 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 KIAA0907Q7Z7F0 614 aaPredicted RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 CHSY1Q86X52 802 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FAM72BQ86X60 149 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 LRRC49Q8IUZ0 686 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 UMODL1-AS1Q8N2C9 162 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 RASGEF1CQ8N431 466 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 SLC44A3Q8N4M1 653 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.9□□□□□ -0.98
USP46-207ENST00000508499 KCTD6Q8NC69 237 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 RAPGEF5Q92565 580 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 FATE1Q969F0 183 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 TBC1D31Q96DN5 1066 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 TMA16Q96EY4 203 aaKnown RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 PBKQ96KB5 322 aa8.9□□□□□ -0.98
USP46-207ENST00000508499 PRICKLE1Q96MT3 831 aaPredicted RBP8.9□□□□□ -0.98
USP46-207ENST00000508499 CSPG4P5Q96PW8 444 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms