RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SCNM1Q9BWG6 230 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 ADAM33Q9BZ11 813 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 ZDHHC5Q9C0B5 715 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 MIR1-1HGQ9H1L0 117 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 PCED1AQ9H1Q7 454 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 MTG2Q9H4K7 406 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 C6orf106Q9H6K1 298 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 POPDC2Q9HBU9 364 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 EIF2B4Q9UI10 523 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 TP53BP1Q12888 1972 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 DMXL2Q8TDJ6 3036 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 TMEM131Q92545 1883 aa13.48□□□□□ -0.25
HMGCS1-205ENST00000508319 PLXNA2O75051 1894 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 CAPN9O14815 690 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 APOEP02649 317 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 PON1P27169 355 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 YWHAZP63104 245 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 BNC1Q01954 994 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 ZBTB16Q05516 673 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC14A1Q13336 389 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 EIF4EBP2Q13542 120 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 ZC3H12AQ5D1E8 599 aaKnown RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 FSCBQ5H9T9 825 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 MMS22LQ6ZRQ5 1243 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 CHSY1Q86X52 802 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 CFAP52Q8N1V2 620 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 GATA6Q92908 595 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 BTN2A3PQ96KV6 586 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 MRGPRX3Q96LB0 322 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 CPXM1Q96SM3 734 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 THAP9Q9H5L6 903 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 SIX2Q9NPC8 291 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 AJAP1Q9UKB5 411 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 ZFYVE26Q68DK2 2539 aa13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 ANKRD11Q6UB99 2663 aaPredicted RBP13.47□□□□□ -0.25
HMGCS1-205ENST00000508319 GTPBP10A4D1E9 387 aaKnown RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 HYAL3O43820 417 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 SH3BP5O60239 455 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 SEMA4FO95754 770 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 DNTTP04053 509 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 ASLP04424 464 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 TACR2P21452 398 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 USP8P40818 1118 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 CTSOP43234 321 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 HNRNPA1L2Q32P51 320 aaKnown RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 RAP1GAP2Q684P5 730 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 ZNF776Q68DI1 518 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 CREBRFQ8IUR6 639 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 PASD1Q8IV76 773 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 NAXDQ8IW45 347 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 LGI2Q8N0V4 545 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 WDTC1Q8N5D0 677 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 KDM1BQ8NB78 822 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 SNX19Q92543 992 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 CAMK1GQ96NX5 476 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 SLC2A13Q96QE2 648 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 IL21RQ9HBE5 538 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.25
HMGCS1-205ENST00000508319 ITIH6Q6UXX5 1313 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 SIN3BO75182 1162 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 HNRNPDQ14103 355 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 CIR1Q86X95 450 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 PRMT1Q99873 361 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 ORAI3Q9BRQ5 295 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 PABPC3Q9H361 631 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 GAREM1Q9H706 876 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 SGK2Q9HBY8 427 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 ASNSD1Q9NWL6 643 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 SERGEFQ9UGK8 458 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 SUN2Q9UH99 717 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 FNDC3AQ9Y2H6 1198 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 LAMA5O15230 3695 aa13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 DSPP15924 2871 aaKnown RBP13.45□□□□□ -0.26
HMGCS1-205ENST00000508319 A0A1B0GVT2 93 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 KCNU1A8MYU2 1149 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 F5H5T6 163 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 H0Y626 953 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 HSF2BPO75031 334 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 CER1O95813 267 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 GLI1P08151 1106 aa13.44□□□□□ -0.26
HMGCS1-205ENST00000508319 SRPRAP08240 638 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms