RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 AP5Z1O43299 807 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 PAGE1O75459 146 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 CLDN11O75508 207 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 EPHX1P07099 455 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 C7P10643 843 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 TGM1P22735 817 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 SDC4P31431 198 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 CD70P32970 193 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 FLT3P36888 993 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 SULT2A1Q06520 285 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 SPEM2Q0P670 501 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 LMAN2Q12907 356 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 CAMK2GQ13555 558 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-209ENST00000508290 AUHQ13825 339 aaKnown RBP20.53■□□□□ 0.88
SFXN1-209ENST00000508290 NR1I3Q14994 352 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 FUT11Q495W5 492 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 C5orf22Q49AR2 442 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 OTUD1Q5VV17 481 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-209ENST00000508290 KIAA1211LQ6NV74 962 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 LRRC31Q6UY01 552 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 BNIPLQ7Z465 357 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 CFAP52Q8N1V2 620 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 C3orf20Q8ND61 904 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 BAP1Q92560 729 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 HAPLN3Q96S86 360 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 C11orf70Q9BRQ4 267 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 TKTL2Q9H0I9 626 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 TMEM245Q9H330 911 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 PRDM16Q9HAZ2 1276 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 SEPT11Q9NVA2 429 aaKnown RBP20.53■□□□□ 0.88
SFXN1-209ENST00000508290 RAD54BQ9Y620 910 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 ATG2BQ96BY7 2078 aa20.53■□□□□ 0.88
SFXN1-209ENST00000508290 ANKRD62A6NC57 917 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 DCLK1O15075 740 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 ENDOD1O94919 500 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 TPM3P06753 285 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 SRPRAP08240 638 aaKnown RBP20.52■□□□□ 0.88
SFXN1-209ENST00000508290 ZNF806P0C7X5 589 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 DESP17661 470 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 HOXD12P35452 270 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 PTPN9P43378 593 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 PLK1P53350 603 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 ZBTB16Q05516 673 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 ARID5BQ14865 1188 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 ARL13BQ3SXY8 428 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 FBXL22Q6P050 247 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 LUZP1Q86V48 1076 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
SFXN1-209ENST00000508290 WFDC5Q8TCV5 224 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 PRCCQ92733 491 aaPredicted RBP20.52■□□□□ 0.88
SFXN1-209ENST00000508290 VCPIP1Q96JH7 1222 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 TBCBQ99426 244 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 METTL5Q9NRN9 209 aaKnown RBP20.52■□□□□ 0.88
SFXN1-209ENST00000508290 AIPL1Q9NZN9 384 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 HS3ST4Q9Y661 456 aa20.52■□□□□ 0.88
SFXN1-209ENST00000508290 BCLAF3A2AJT9 711 aaKnown RBP20.51■□□□□ 0.87
SFXN1-209ENST00000508290 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 KRT3P12035 628 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PRKCHP24723 683 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 OXTRP30559 389 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 MPLP40238 635 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 FANCCQ00597 558 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PTPRNQ16849 979 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PITRM1Q5JRX3 1037 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PLA2G2CQ5R387 149 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 RNF219Q5W0B1 726 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PRR23CQ6ZRP0 262 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 STRADAQ7RTN6 431 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 IRF2BP2Q7Z5L9 587 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 OR2T3Q8NH03 318 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 SLC30A5Q8TAD4 765 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 SORCS1Q8WY21 1168 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 NAP1L5Q96NT1 182 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PCDHB18PQ96TA0 734 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 SELENOOQ9BVL4 669 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 ARRDC1-AS1Q9H2J1 176 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 RETREG1Q9H6L5 497 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 PARD6AQ9NPB6 346 aa20.51■□□□□ 0.87
SFXN1-209ENST00000508290 WDR87Q6ZQQ6 2873 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 A0A1W2PQJ5 194 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 LRRC53A6NM62 1247 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 ACADMP11310 421 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 PDGFRAP16234 1089 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 NNMTP40261 264 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 CSKP41240 450 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 PRKCIP41743 596 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 VASPP50552 380 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 CDH4P55283 916 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 UBASH3AP57075 661 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 SFSWAPQ12872 951 aaKnown RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 PTP4A2Q12974 167 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 ZNF177Q13360 481 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 ASIC2Q16515 512 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 PLEKHG6Q3KR16 790 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 C2CD6Q53TS8 623 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 SFMBT2Q5VUG0 894 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 KIAA1324Q6UXG2 1013 aaKnown RBP20.5■□□□□ 0.87
SFXN1-209ENST00000508290 MON1BQ7L1V2 547 aa20.5■□□□□ 0.87
SFXN1-209ENST00000508290 CYP2U1Q7Z449 544 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms