RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ABL2P42684 1182 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 CCNG1P51959 295 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 BHLHA9Q7RTU4 235 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 MTG1Q9BT17 334 aaPredicted RBP14.9□□□□□ -0.02
DDX41-208ENST00000507955 RNPEPL1Q9HAU8 725 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 HEY2Q9UBP5 337 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 PLLPQ9Y342 182 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 TRPM7Q96QT4 1865 aa14.9□□□□□ -0.02
DDX41-208ENST00000507955 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 IGHA2P01877 340 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 LTFP02788 710 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 SRGAP2BP0DMP2 458 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 PGGT1BP53609 377 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 CLNKQ7Z7G1 428 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 AZIN2Q96A70 460 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 SIK2Q9H0K1 926 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 MOCS1Q9NZB8 636 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 KLHL8Q9P2G9 620 aaPredicted RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 SHROOM3Q8TF72 1996 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 MANSC4A6NHS7 340 aaPredicted RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 C2CD2LO14523 706 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 TRDMT1O14717 391 aaKnown RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 ENTPD5O75356 428 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 ATP5HO75947 161 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 ASGR1P07306 291 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 OR4Q2P0C623 313 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 TPBGLP0DKB5 382 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 SERPINB3P29508 390 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 ALDH3A1P30838 453 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 NUMBP49757 651 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 TPI1P60174 286 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 FYB2Q5VWT5 728 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 FCRL3Q96P31 734 aaPredicted RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 COLEC11Q9BWP8 271 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 DENND2DQ9H6A0 471 aaPredicted RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 TRMT13Q9NUP7 481 aaKnown RBP14.89□□□□□ -0.03
DDX41-208ENST00000507955 ZFP69BQ9UJL9 534 aa14.89□□□□□ -0.03
DDX41-208ENST00000507955 ZNF236Q9UL36 1845 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 SDR42E2A6NKP2 422 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 GOLGA8TH3BQL2 631 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 TPH1P17752 444 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 FLT3LGP49771 235 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 BST1Q10588 318 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ZBTB17Q13105 803 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 RFWD3Q6PCD5 774 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 USP33Q8TEY7 942 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 LBHD1Q9BQE6 289 aaPredicted RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 TMEM120AQ9BXJ8 343 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 XAB2Q9HCS7 855 aaKnown RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 ARMCX1Q9P291 453 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 OR12D3Q9UGF7 316 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 FBXW11Q9UKB1 542 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 Q9Y3F1 56 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 H0Y3Z8 333 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ALDOAP04075 364 aaKnown RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 CYBAP13498 195 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 PTPN3P26045 913 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 LHX1P48742 406 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 PDK1Q15118 436 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 CHI3L2Q15782 390 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 RGMBQ6NW40 437 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ARHGAP36Q6ZRI8 547 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 SERINC5Q86VE9 423 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 HACE1Q8IYU2 909 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ADAM2Q99965 735 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 FRMD8Q9BZ67 464 aaPredicted RBP14.88□□□□□ -0.03
DDX41-208ENST00000507955 WDCPQ9H6R7 721 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 SLC38A7Q9NVC3 462 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 ZNF358Q9NW07 568 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 TSC2P49815 1807 aa14.88□□□□□ -0.03
DDX41-208ENST00000507955 TRAFD1O14545 582 aaPredicted RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 B4GALT3O60512 393 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 KRT38O76015 456 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 DLDP09622 509 aaKnown RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 TROVE2P10155 538 aaKnown RBP eCLIP14.87□□□□□ -0.03
DDX41-208ENST00000507955 MYL2P10916 166 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 ELNP15502 786 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 CALB2P22676 271 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 GLUD2P49448 558 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 TMPRSS15P98073 1019 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 KCNA10Q16322 511 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 HSF5Q4G112 596 aaPredicted RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 CD300LGQ6UXG3 332 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 ALYREFQ86V81 257 aaKnown RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 RNF34Q969K3 372 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 LRRC39Q96DD0 335 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 FAM167BQ9BTA0 163 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 TRIM55Q9BYV6 548 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 ZFYVE28Q9HCC9 887 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 ZNF180Q9UJW8 692 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 RPS6KL1Q9Y6S9 549 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 TPP1O14773 563 aa14.87□□□□□ -0.03
DDX41-208ENST00000507955 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
DDX41-208ENST00000507955 KIF1CO43896 1103 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms