RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 UBAP1Q9NZ09 502 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 HSPBP1Q9NZL4 362 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 CAPN11Q9UMQ6 739 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 PDE4DIPQ5VU43 2346 aa7.45□□□□□ -1.22
CLCN3-206ENST00000507875 LRRIQ4A6NIV6 560 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 FAM47E-STBD1D6RA91 191 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 ADCY6O43306 1168 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 EXOC3O60645 756 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 KIAA0754O94854 1291 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 MARK3P27448 753 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 PACS1Q6VY07 963 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 RSPH3Q86UC2 560 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF397Q8NF99 534 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 OR10H5Q8NGA6 315 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 OR8H1Q8NGG4 311 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 MFSD14AQ96MC6 490 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TTLL2Q9BWV7 592 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CAPS2Q9BXY5 557 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 XPNPEP3Q9NQH7 507 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 SUFUQ9UMX1 484 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 PHF24Q9UPV7 400 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TNFSF13BQ9Y275 285 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 SQORQ9Y6N5 450 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 BRCA2P51587 3418 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TOM1L1O75674 476 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TBX18O95935 607 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CSTBP04080 98 aaKnown RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 PRKCBP05771 671 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF286BP0CG31 522 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 MYF5P13349 255 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 FGFR4P22455 802 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CTSSP25774 331 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CD86P42081 329 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 RAB1AP62820 205 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 BFSP1Q12934 665 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 ERCC6LQ2NKX8 1250 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 MARCH8Q5T0T0 291 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TMEM63BQ5T3F8 832 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CACNA2D3Q8IZS8 1091 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 C7orf31Q8N865 590 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 SYN2Q92777 582 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 BICD1Q96G01 975 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 GCOM2Q9BZD3 368 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 IRX2Q9BZI1 471 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TTYH3Q9C0H2 523 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 ATXN3LQ9H3M9 355 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 LRFN1Q9P244 771 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 TRIP12Q14669 1992 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-206ENST00000507875 CNTNAP2Q9UHC6 1331 aa7.44□□□□□ -1.22
CLCN3-206ENST00000507875 MKI67P46013 3256 aaKnown RBP7.43□□□□□ -1.22
CLCN3-206ENST00000507875 A0A0B4J269 797 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 A0A0U1RQJ8 604 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 ZNF233A6NK53 670 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 HNRNPDLO14979 420 aaKnown RBP7.43□□□□□ -1.22
CLCN3-206ENST00000507875 AKAP3O75969 853 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MCF2P10911 925 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 TRIM21P19474 475 aaKnown RBP7.43□□□□□ -1.22
CLCN3-206ENST00000507875 RAB6AP20340 208 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 PROZP22891 400 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 VAMP7P51809 220 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MAP2K6P52564 334 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MRPS35P82673 323 aaKnown RBP7.43□□□□□ -1.22
CLCN3-206ENST00000507875 AP1ARQ63HQ0 302 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 GBP6Q6ZN66 633 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 LYSMD2Q8IV50 215 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CD302Q8IX05 232 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MFSD2AQ8NA29 543 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 POMGNT1Q8WZA1 660 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CHP1Q99653 195 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CITO14578 2027 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 ADGRA3Q8IWK6 1321 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 EFCAB8A8MWE9 144 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 ZC3H11AO75152 810 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLCN3-206ENST00000507875 IL18RAPO95256 599 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CYP2C9P11712 490 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 ANXA13P27216 316 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 GPC3P51654 580 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MBTD1Q05BQ5 628 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CDK5R2Q13319 367 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 STARD3Q14849 445 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 PSMD6Q15008 389 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MEA1Q16626 185 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 DUOXA2Q1HG44 320 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 DCAF4L1Q3SXM0 396 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 WDR59Q6PJI9 974 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 MPZL3Q6UWV2 235 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 FRMD7Q6ZUT3 714 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 RHPN2Q8IUC4 686 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 METTL13Q8N6R0 699 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 RNF149Q8NC42 400 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 NEK11Q8NG66 645 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 SLC35C1Q96A29 364 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CHCHD6Q9BRQ6 235 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 CARD6Q9BX69 1037 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 AGPAT5Q9NUQ2 364 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
CLCN3-206ENST00000507875 AGO2Q9UKV8 859 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms