RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 MTBPQ96DY7 904 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 STAMBPL1Q96FJ0 436 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 APOPT1Q96IL0 206 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 VAT1Q99536 393 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 VPS11Q9H270 941 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 STARD7Q9NQZ5 370 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 ARL2BPQ9Y2Y0 163 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SNRPAP09012 282 aaKnown RBP18.15■□□□□ 0.5
SFXN1-208ENST00000507823 LIG3P49916 1009 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 CDK7P50613 346 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 TRPM8Q7Z2W7 1104 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 CCNYQ8ND76 341 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 TCP10LQ8TDR4 215 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 TTC17Q96AE7 1141 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 HMX1Q9NP08 348 aaPredicted RBP18.15■□□□□ 0.5
SFXN1-208ENST00000507823 TRHDEQ9UKU6 1024 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 VWA8A3KMH1 1905 aa18.14■□□□□ 0.5
SFXN1-208ENST00000507823 DNM1LO00429 736 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 KRT37O76014 449 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 GARSP41250 739 aaKnown RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 MRPL58Q14197 206 aaKnown RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 HHATQ5VTY9 493 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 RNF43Q68DV7 783 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 DCP1BQ8IZD4 617 aaKnown RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 PPM1NQ8N819 430 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 EDF1O60869 148 aaKnown RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 SELPP16109 830 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 NRG1Q02297 640 aaPredicted RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 NAB1Q13506 487 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 PPP2R5DQ14738 602 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 LGSNQ5TDP6 509 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 KCTD11Q693B1 232 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 TIFABQ6ZNK6 161 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 MARK2Q7KZI7 788 aaKnown RBP18.14■□□□□ 0.49
SFXN1-208ENST00000507823 LRRC8DQ7L1W4 858 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 CHSY1Q86X52 802 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 NETO2Q8NC67 525 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 PITPNM3Q9BZ71 974 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 IL37Q9NZH6 218 aa18.14■□□□□ 0.49
SFXN1-208ENST00000507823 MYO16Q9Y6X6 1858 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 ERI2A8K979 691 aaKnown RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 TRPA1O75762 1119 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 CSH1P0DML2 217 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 CSH2P0DML3 217 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 MAGEA11P43364 429 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 SERPINB9P50453 376 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 FRG1Q14331 258 aaKnown RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 GPNMBQ14956 572 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 NFE2Q16621 373 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 TRMT10BQ6PF06 316 aaKnown RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 TSGA13Q96PP4 275 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 SLC12A4Q9UP95 1085 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 SCML2Q9UQR0 700 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 MAD1L1Q9Y6D9 718 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 CACNG3O60359 315 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 AP2A1O95782 977 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 PGAM1P18669 254 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 EPHB2P29323 1055 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 PRMT2P55345 433 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 NIPAL4Q0D2K0 466 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 IFRD2Q12894 506 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 GALNTL6Q49A17 601 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 MSANTD2Q6P1R3 559 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 ZNF75CPQ92670 426 aaPredicted RBP18.13■□□□□ 0.49
SFXN1-208ENST00000507823 GBA3Q9H227 469 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 SNX10Q9Y5X0 201 aa18.13■□□□□ 0.49
SFXN1-208ENST00000507823 RFPL1O75677 317 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 ADRA1DP25100 572 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 CNTFP26441 200 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 GRIK1P39086 918 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 ZKSCAN8Q15776 578 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-208ENST00000507823 PID1Q7Z2X4 250 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 LRRC8CQ8TDW0 803 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 PAIP2Q9BPZ3 127 aaKnown RBP18.12■□□□□ 0.49
SFXN1-208ENST00000507823 HAUS2Q9NVX0 235 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 KCNU1A8MYU2 1149 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 TRIM49D1C9J1S8 452 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 KRT38O76015 456 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 CD68P34810 354 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-208ENST00000507823 SCTRP47872 440 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 SLC39A12Q504Y0 691 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 TEX44Q53QW1 395 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 BTBD8Q5XKL5 378 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 CTAGE3PQ8IX95 158 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 KLHL8Q9P2G9 620 aaPredicted RBP18.12■□□□□ 0.49
SFXN1-208ENST00000507823 PHTF1Q9UMS5 762 aa18.12■□□□□ 0.49
SFXN1-208ENST00000507823 FAM92AA1XBS5 289 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 WDR27A2RRH5 827 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 HMX2A2RU54 273 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 KCNK1O00180 336 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 LPXNO60711 386 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 PGFP49763 221 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 DNAJC3Q13217 504 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 TRIM56Q9BRZ2 755 aaKnown RBP18.11■□□□□ 0.49
SFXN1-208ENST00000507823 NMUR1Q9HB89 426 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 CASS4Q9NQ75 786 aa18.11■□□□□ 0.49
SFXN1-208ENST00000507823 SEPT10Q9P0V9 454 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms