RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 PLK5Q496M5 336 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 SPDYCQ5MJ68 293 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 EMC10Q5UCC4 262 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 BSPRYQ5W0U4 402 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 GRAMD4Q6IC98 578 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 SDE2Q6IQ49 451 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 CCDC70Q6NSX1 233 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 TMEM270Q6UE05 265 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 PRR23CQ6ZRP0 262 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 C11orf57Q6ZUT1 292 aaPredicted RBP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 ENOSF1Q7L5Y1 443 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 DGLUCYQ7Z3D6 616 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 MIB1Q86YT6 1006 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 PPM1KQ8N3J5 372 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 CPXM2Q8N436 756 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 CCDC33Q8N5R6 958 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 ALLCQ8N6M5 410 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 TERB1Q8NA31 727 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 MLKLQ8NB16 471 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 TXNDC5Q8NBS9 432 aaKnown RBP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 OLIG1Q8TAK6 271 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 MAGEC3Q8TD91 643 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 IRGQQ8WZA9 623 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 HSFY1Q96LI6 401 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 PANX2Q96RD6 677 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 RTKNQ9BST9 563 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 SLC2A11Q9BYW1 496 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 ULBP1Q9BZM6 244 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 XPO4Q9C0E2 1151 aaKnown RBP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 ABCC13Q9NSE7 274 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 POLR3BQ9NW08 1133 aaPredicted RBP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 MARCH2Q9P0N8 246 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 VPS18Q9P253 973 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 NUDT5Q9UKK9 219 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 SLC27A6Q9Y2P4 619 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 PCDHB4Q9Y5E5 795 aa8.36□□□□□ -1.07
SCN1A-207ENST00000507401 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 MYO18AQ92614 2054 aaKnown RBP8.36□□□□□ -1.07
SCN1A-207ENST00000507401 NEDD8-MDP1E9PL57 170 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 GFRA2O00451 464 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 SLC30A4O14863 429 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 CHUKO15111 745 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 NPC1O15118 1278 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 MDM4O15151 490 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 TIMM44O43615 452 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 ADAM23O75077 832 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 FBXO21O94952 628 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 KLF8O95600 359 aaPredicted RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 LATS1O95835 1130 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 PENKP01210 267 aaPredicted RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 BMP2P12643 396 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 HNRNPLP14866 589 aaKnown RBP eCLIP8.35□□□□□ -1.073e-6■■□□□ 12.6
SCN1A-207ENST00000507401 NTSR1P30989 418 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 RPL34P49207 117 aaKnown RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 DGKGP49619 791 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 LIMK1P53667 647 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 STX17P56962 302 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 FANCCQ00597 558 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 EFEMP1Q12805 493 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 MEA1Q16626 185 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 C10orf76Q5T2E6 689 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 TPGS1Q6ZTW0 290 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 RRAGAQ7L523 313 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 BHLHA9Q7RTU4 235 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 FAM217AQ8IXS0 508 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 CNPY4Q8N129 248 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 SIX6OS1Q8N1H7 587 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 ZNF513Q8N8E2 541 aaPredicted RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 C3orf20Q8ND61 904 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 GIMAP7Q8NHV1 300 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 UBA3Q8TBC4 463 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 RNF139Q8WU17 664 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 TFAP2BQ92481 460 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 P3H4Q92791 437 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 AZIN2Q96A70 460 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 PLD4Q96BZ4 506 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 CABS1Q96KC9 395 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 BAG1Q99933 345 aaPredicted RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 ARRDC1-AS1Q9H2J1 176 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 VPS45Q9NRW7 570 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 DNAJC17Q9NVM6 304 aaKnown RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 IFNKQ9P0W0 207 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 LCMT1Q9UIC8 334 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 RASAL2Q9UJF2 1139 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 STOML2Q9UJZ1 356 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 AGO1Q9UL18 857 aaKnown RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 HBS1LQ9Y450 684 aaKnown RBP8.35□□□□□ -1.07
SCN1A-207ENST00000507401 DNAH14Q0VDD8 3507 aa8.35□□□□□ -1.07
SCN1A-207ENST00000507401 SLC12A8A0AV02 714 aa8.34□□□□□ -1.07
SCN1A-207ENST00000507401 BCLAF3A2AJT9 711 aaKnown RBP8.34□□□□□ -1.07
SCN1A-207ENST00000507401 GTPBP10A4D1E9 387 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms