RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 E5RJQ4 531 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 MED7O43513 233 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 CBFA2T3O75081 653 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 SIN3BO75182 1162 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 GADD45BO75293 160 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 FSBPO95073 299 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 APOEP02649 317 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 ASLP04424 464 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 ACADSBP45954 432 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 AFF3P51826 1226 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 ST8SIA6P61647 398 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 NNTQ13423 1086 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 TEAD4Q15561 434 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 FSCBQ5H9T9 825 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 PITRM1Q5JRX3 1037 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 SYPL2Q5VXT5 272 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 RAP1GAP2Q684P5 730 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 LAYNQ6UX15 382 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 MMS22LQ6ZRQ5 1243 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 CCDC117Q8IWD4 279 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 DHX40Q8IX18 779 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 LGI2Q8N0V4 545 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 PNPLA1Q8N8W4 532 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 GANCQ8TET4 914 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 ADAMTS14Q8WXS8 1223 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 MRGPRX3Q96LB0 322 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 TRIM62Q9BVG3 475 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 RSPH9Q9H1X1 276 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 TM9SF3Q9HD45 589 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 UBE2TQ9NPD8 197 aaPredicted RBP11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 CYTH4Q9UIA0 394 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 SNX11Q9Y5W9 270 aa11.96□□□□□ -0.49
HMGCS1-204ENST00000507293 AKAP13Q12802 2813 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 CAPN9O14815 690 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 FLRT2O43155 660 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 PAPSS1O43252 624 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 THAP12O43422 761 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 LETM1O95202 739 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 TACR2P21452 398 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 CD27P26842 260 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 GNA15P30679 374 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 CTSOP43234 321 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 GRIA4P48058 902 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 PITX1P78337 314 aaPredicted RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 MEA1Q16626 185 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 KIF19Q2TAC6 998 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 HNRNPA1L2Q32P51 320 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 DCAF6Q58WW2 860 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ZC3H12AQ5D1E8 599 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 KIAA0895LQ68EN5 471 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 GJB7Q6PEY0 223 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 BEND5Q7L4P6 421 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 GLRX5Q86SX6 157 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 CHSY1Q86X52 802 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 STK32AQ8WU08 396 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ZNF606Q8WXB4 792 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 CRACR2AQ9BSW2 395 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 SGK2Q9HBY8 427 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 OSGEPQ9NPF4 335 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ACP6Q9NPH0 428 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 TJP2Q9UDY2 1190 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 SERGEFQ9UGK8 458 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ERVW-1Q9UQF0 538 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 NCKAP1Q9Y2A7 1128 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ANKRD6Q9Y2G4 727 aa11.95□□□□□ -0.5
HMGCS1-204ENST00000507293 ITIH6Q6UXX5 1313 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 A0A1W2PP55 124 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM47DPA6NHR8 397 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 TTC34A8MYJ7 566 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 MOCS3O95396 460 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 TRUB2O95900 331 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 IGLV3-25P01717 112 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 IGHV4-34P06331 123 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 SRPRAP08240 638 aaKnown RBP11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 PDCLQ13371 301 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 CST6Q15828 149 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 TRIM65Q6PJ69 517 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 USP30Q70CQ3 517 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 TMEM110Q86TL2 294 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 SLCO6A1Q86UG4 719 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 BAHD1Q8TBE0 780 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 RHBDD1Q8TEB9 315 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 POPDC2Q9HBU9 364 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 FBXL12Q9NXK8 326 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 KIAA1522Q9P206 1035 aaPredicted RBP11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 SCML1Q9UN30 329 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 BTBD3Q9Y2F9 522 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 PCDHGB2Q9Y5G2 931 aa11.94□□□□□ -0.5
HMGCS1-204ENST00000507293 BECN2A8MW95 431 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 F5H5T6 163 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 KCNK3O14649 394 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 MID1O15344 667 aa11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 RNASEH1O60930 286 aaKnown RBP11.93□□□□□ -0.5
HMGCS1-204ENST00000507293 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms