RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 LPAR3Q9UBY5 353 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ACAD8Q9UKU7 415 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 XRN1Q8IZH2 1706 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ARHGAP23Q9P227 1491 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 ANKARQ7Z5J8 1434 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 PHRF1Q9P1Y6 1649 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-208ENST00000506971 TTC21AQ8NDW8 1320 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 SMIM35A0A1B0GVV1 85 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 B4E171 279 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 UBE2Q2LH0YL09 131 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 EIF3FO00303 357 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 IRAK2O43187 625 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 FRS3O43559 492 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 SRGAP2O75044 1071 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 SKAP2O75563 359 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 TUBB4AP04350 444 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 PRKCBP05771 671 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 CSF1RP07333 972 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 BRAFP15056 766 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 KCNA3P22001 575 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ADD2P35612 726 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 TSPAN7P41732 249 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 COPB1P53618 953 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 CLNS1AP54105 237 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 NAP1L1P55209 391 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 RABEP1Q15276 862 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 FAM209BQ5JX69 171 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF425Q6IV72 752 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 KIRREL2Q6UWL6 708 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 GALNT5Q7Z7M9 940 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 CACNA2D3Q8IZS8 1091 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 CHCHD4Q8N4Q1 142 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 LSMEM1Q8N8F7 131 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 PCYOX1LQ8NBM8 494 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 DNAJB14Q8TBM8 379 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 COG3Q96JB2 828 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZSCAN31Q96LW9 406 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 LENG8Q96PV6 779 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 RMDN3Q96TC7 470 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 TRIM54Q9BYV2 358 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 API5Q9BZZ5 524 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 SEMA4CQ9C0C4 833 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 UBN1Q9NPG3 1134 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 WASH6PQ9NQA3 447 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ISY1Q9ULR0 285 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 OVOS2A0A0J9YW53 1432 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 OVOS2Q6IE36 1432 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ARHGEF10O15013 1369 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF142P52746 1687 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 KPNA5O15131 536 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 TP73O15350 636 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 NCK2O43639 380 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 DHX16O60231 1041 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 GFPT2O94808 682 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 VEGFAP15692 232 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 HOXD12P35452 270 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 TNNT2P45379 298 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SUMO3P55854 103 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 WNT3P56703 355 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 RIPK4P57078 832 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 ROR1Q01973 937 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 PRKG1Q13976 671 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 ZNF268Q14587 947 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 STARD3Q14849 445 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 DCAF12L1Q5VU92 463 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 ITPRIPL1Q6GPH6 555 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SWSAP1Q6NVH7 229 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SYTL1Q8IYJ3 562 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 ZNF527Q8NB42 609 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 KBTBD7Q8WVZ9 684 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SOCS4Q8WXH5 440 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 BRI3BPQ8WY22 251 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 GOLGA1Q92805 767 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 RSRC1Q96IZ7 334 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 CCDC17Q96LX7 622 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 HS6ST2Q96MM7 605 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 PRR25Q96S07 402 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 MMS19Q96T76 1030 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 TREX2Q9BQ50 279 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 MESP1Q9BRJ9 268 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 LMAN2LQ9H0V9 348 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 PLEKHA5Q9HAU0 1116 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 NSMCE4AQ9NXX6 385 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 CPNE7Q9UBL6 633 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 SLC13A4Q9UKG4 626 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 AMFRQ9UKV5 643 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 MAGED2Q9UNF1 606 aaPredicted RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 PTPRUQ92729 1446 aa4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 FAM208AQ9UK61 1670 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-208ENST00000506971 USP19O94966 1318 aa4.76□□□□□ -1.65
CALCOCO2-208ENST00000506971 WDR17Q8IZU2 1322 aa4.76□□□□□ -1.65
CALCOCO2-208ENST00000506971 PXDNLA1KZ92 1463 aa4.76□□□□□ -1.65
CALCOCO2-208ENST00000506971 LMTK3Q96Q04 1460 aa4.76□□□□□ -1.65
CALCOCO2-208ENST00000506971 A0A087WWL8 130 aa4.76□□□□□ -1.65
CALCOCO2-208ENST00000506971 F5H0A9 414 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms