RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 C21orf58P58505 322 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PSMC6P62333 389 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PTH1RQ03431 593 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TROAPQ12815 778 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RUNX2Q13950 521 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MFSD13AQ14CX5 517 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SLC39A14Q15043 492 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 KCNJ8Q15842 424 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TAF12Q16514 161 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PFKFB4Q16877 469 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LSM12Q3MHD2 195 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RBM20Q5T481 1227 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VWA5B1Q5TIE3 1220 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FOXR2Q6PJQ5 311 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LRIG3Q6UXM1 1119 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EPM2AIP1Q7L775 607 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VPS36Q86VN1 386 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PM20D2Q8IYS1 436 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PRR18Q8N4B5 295 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC89Q8N998 374 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NAT8LQ8N9F0 302 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DAGLBQ8NCG7 672 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LPIN2Q92539 896 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MRPS27Q92552 414 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EME1Q96AY2 570 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RNF170Q96K19 258 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CEP170P1Q96L14 293 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ELF4Q99607 663 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM109Q9BVC6 243 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 PHF20Q9BVI0 1012 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 MXD3Q9BW11 206 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RNF41Q9H4P4 317 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NCOR1P1Q9H4R4 102 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VCX3AQ9NNX9 186 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 OLFML3Q9NRN5 406 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EURLQ9NYK6 297 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CPSF3Q9UKF6 684 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 VANGL2Q9ULK5 521 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ERVK-11Q9UQG0 969 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FNDC3AQ9Y2H6 1198 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 LRRD1A4D1F6 860 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SLC9B1P1A6NJY1 282 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SLC22A31A6NKX4 558 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 HNRNPCL2B2RXH8 293 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CPLX1O14810 134 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CYP21A2P08686 494 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 SELPP16109 830 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 CDC25CP30307 473 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 IGFALSP35858 605 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ATP6V1E1P36543 226 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RGS2P41220 211 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF165P49910 485 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 RTP1P59025 263 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 GNGT1P63211 74 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 UBE2IP63279 158 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 NIPAL1Q6NVV3 410 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF449Q6P9G9 518 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 BNIPLQ7Z465 357 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGAP24Q8N264 748 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 WHAMMQ8TF30 809 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 YME1L1Q96TA2 773 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF576Q9H609 170 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 IFT22Q9H7X7 185 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 TRPV4Q9HBA0 871 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EMC7Q9NPA0 242 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FAM114A2Q9NRY5 505 aa2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DDX19AQ9NUU7 478 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DIMT1Q9UNQ2 313 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 REXO2Q9Y3B8 237 aaKnown RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 EPN1Q9Y6I3 576 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-205ENST00000506154 DBX1A6NMT0 343 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KRIT1O00522 736 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 DYNC1LI2O43237 492 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 WISP1O95388 367 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RPS17P08708 135 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RARGP13631 454 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 RPL10P27635 214 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ADORA1P30542 326 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 KIF11P52732 1056 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TARDBPQ13148 414 aaKnown RBP eCLIP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 SELENBP1Q13228 472 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 PSMD5Q16401 504 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 WASHC2DQ5SRD0 308 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 FKBP9P1Q75LS8 142 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MARK2Q7KZI7 788 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 NIPA1Q7RTP0 329 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MAMDC2Q7Z304 686 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 LYSMD3Q7Z3D4 306 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TTC7BQ86TV6 843 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TBC1D21Q8IYX1 336 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 MAGEB6Q8N7X4 407 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 NAT16Q8N8M0 369 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 XXYLT1Q8NBI6 393 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 GLB1L3Q8NCI6 653 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 TNIP2Q8NFZ5 429 aa2.34□□□□□ -2.03
NEDD4-205ENST00000506154 INPP4AQ96PE3 977 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 ELAC2Q9BQ52 826 aaKnown RBP2.34□□□□□ -2.03
NEDD4-205ENST00000506154 CEP44Q9C0F1 390 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms