RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 CRACR2AQ9BSW2 395 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 OSGEPQ9NPF4 335 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 ZMIZ1Q9ULJ6 1067 aa12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.49□□□□□ -0.41
PDLIM7-214ENST00000505746 TARSL2A2RTX5 802 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 FAM221BA6H8Z2 402 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 FSBPO95073 299 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 GLI1P08151 1106 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC2A3P11169 496 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC9A1P19634 815 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 TACR2P21452 398 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CSNK1EP49674 416 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 SNX16P57768 344 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CDK17Q00537 523 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 PDCLQ13371 301 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 ARID5BQ14865 1188 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 SUZ12Q15022 739 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CAMK4Q16566 473 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 ARHGAP44Q17R89 818 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 EXOC3L4Q17RC7 722 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 HLA-BQ31612 363 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 HNRNPA1L2Q32P51 320 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 FSCBQ5H9T9 825 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 PITRM1Q5JRX3 1037 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 RNF219Q5W0B1 726 aaPredicted RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 RAP1GAP2Q684P5 730 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 MLKLQ8NB16 471 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 GANCQ8TET4 914 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 GATA6Q92908 595 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 MYEOVQ96EZ4 313 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 MYO19Q96H55 970 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 MRGPRX3Q96LB0 322 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 NOX5Q96PH1 765 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 PABPC3Q9H361 631 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 IL21RQ9HBE5 538 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 TM7SF3Q9NS93 570 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 APEX2Q9UBZ4 518 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CYTH4Q9UIA0 394 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 INTS6Q9UL03 887 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 ERVW-1Q9UQF0 538 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 CEP83Q9Y592 693 aa12.48□□□□□ -0.41
PDLIM7-214ENST00000505746 MYO18AQ92614 2054 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 CNOT1A5YKK6 2376 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 TPRP12270 2363 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 KCNU1A8MYU2 1149 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 F5H5T6 163 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 SIN3BO75182 1162 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 IGLV3-25P01717 112 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 ABCB4P21439 1286 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 CD27P26842 260 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 NNMTP40261 264 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 MTIF2P46199 727 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 GRIA4P48058 902 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 OXCT1P55809 520 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 ECT2LQ008S8 904 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 BNC1Q01954 994 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PTK2Q05397 1052 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 MTA1Q13330 715 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 SLC12A1Q13621 1099 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 EFHC1Q5JVL4 640 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 TTC39BQ5VTQ0 682 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 GJB7Q6PEY0 223 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 MMS22LQ6ZRQ5 1243 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 GLRX5Q86SX6 157 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 CHCHD4Q8N4Q1 142 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 SHC3Q92529 594 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 RNF34Q969K3 372 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PPP1R13BQ96KQ4 1090 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PPP1R9BQ96SB3 815 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 MTG2Q9H4K7 406 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 FAM204AQ9H8W3 233 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 TM9SF3Q9HD45 589 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 ACP6Q9NPH0 428 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 ASNSD1Q9NWL6 643 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 FBXL12Q9NXK8 326 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 XPO7Q9UIA9 1087 aaKnown RBP12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 KLK13Q9UKR3 277 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PCOLCE2Q9UKZ9 415 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PCDHGC3Q9UN70 934 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 PCDHGB2Q9Y5G2 931 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 EPG5Q9HCE0 2579 aa12.47□□□□□ -0.41
PDLIM7-214ENST00000505746 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 BECN2A8MW95 431 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 FLRT2O43155 660 aa12.46□□□□□ -0.41
PDLIM7-214ENST00000505746 HSF2BPO75031 334 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms