RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PCBP4P57723 403 aaKnown RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 ERVPABLB-1P60509 514 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 YWHAEP62258 255 aaKnown RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 KCNC4Q03721 635 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 KCNH2Q12809 1159 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 DNAJC3Q13217 504 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 CST6Q15828 149 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 RNF219Q5W0B1 726 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 KRT39Q6A163 491 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 ATL3Q6DD88 541 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3GQ6DHY5 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3CQ6IPX1 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 NCEH1Q6PIU2 408 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 PIGZQ86VD9 579 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 MFN1Q8IWA4 741 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 HSCBQ8IWL3 235 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3Q8IZP1 549 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 FAM174AQ8TBP5 190 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TTC17Q96AE7 1141 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 CRELD1Q96HD1 420 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 SERAC1Q96JX3 654 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 SRRTQ9BXP5 876 aaKnown RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 NEUROG2Q9H2A3 272 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 DMTF1Q9Y222 760 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 KNL1Q8NG31 2342 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 COL5A1P20908 1838 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
NEDD9-210ENST00000505589 NEMP2A6NFY4 417 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 B8ZZF3 427 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 XPO1O14980 1071 aaKnown RBP10.29□□□□□ -0.76
NEDD9-210ENST00000505589 BRINP1O60477 761 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 TBL1XO60907 577 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 ALPPL2P10696 532 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 AFMP43652 599 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 DUSP3P51452 185 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-210ENST00000505589 OXCT1P55809 520 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 DLG4P78352 724 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 NUCB2P80303 420 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 TLE3Q04726 772 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SULT2A1Q06520 285 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 CCDC173Q0VFZ6 552 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 ZNF211Q13398 564 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SLC12A1Q13621 1099 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 NFIL3Q16649 462 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 ZNF394Q53GI3 561 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 PIK3R6Q5UE93 754 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 FAM46CQ5VWP2 391 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 BSPRYQ5W0U4 402 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SPOPLQ6IQ16 392 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 FAM173BQ6P4H8 233 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 XKR5Q6UX68 686 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 DSG4Q86SJ6 1040 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SPACA3Q8IXA5 215 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SIX6OS1Q8N1H7 587 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SCML4Q8N228 414 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 DCBLD1Q8N8Z6 715 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 OR14C36Q8NHC7 312 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 PLEKHO2Q8TD55 490 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 SLC6A18Q96N87 628 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 TWNKQ96RR1 684 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 ORAI3Q9BRQ5 295 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 BLZF1Q9H2G9 400 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 USP29Q9HBJ7 922 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 CNGB3Q9NQW8 809 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 USP25Q9UHP3 1055 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 TRAF3IP3Q9Y228 551 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 CEP83Q9Y592 693 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 CKAP5Q14008 2032 aa10.29□□□□□ -0.76
NEDD9-210ENST00000505589 A0A1W2PP55 124 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 SLC7A4O43246 635 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 SIN3BO75182 1162 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 CD2BP2O95400 341 aaKnown RBP10.28□□□□□ -0.76
NEDD9-210ENST00000505589 MT-CO3P00414 261 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 GCLMP48507 274 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 NXPH1P58417 271 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 DAB2P98082 770 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 BST2Q10589 180 aaKnown RBP10.28□□□□□ -0.76
NEDD9-210ENST00000505589 STK4Q13043 487 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 CUL4BQ13620 913 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 SGO2Q562F6 1265 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 KCNT1Q5JUK3 1230 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 PRAMEF14Q5SWL7 426 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 NAPEPLDQ6IQ20 393 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 MMAAQ8IVH4 418 aaKnown RBP10.28□□□□□ -0.76
NEDD9-210ENST00000505589 DHX40Q8IX18 779 aaKnown RBP10.28□□□□□ -0.76
NEDD9-210ENST00000505589 ZNF366Q8N895 744 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 HJURPQ8NCD3 748 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-210ENST00000505589 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 IRGQQ8WZA9 623 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 DEPDC7Q96QD5 511 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 DUSP23Q9BVJ7 150 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 ULBP1Q9BZM6 244 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 ABCG4Q9H172 646 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 CLMPQ9H6B4 373 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 CFAP45Q9UL16 551 aa10.28□□□□□ -0.76
NEDD9-210ENST00000505589 FLNBO75369 2602 aaKnown RBP10.27□□□□□ -0.76
NEDD9-210ENST00000505589 A0A1W2PR77 199 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 417.4 ms