RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MNTQ99583 582 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 TXLNGYQ9BZA5 131 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 USP44Q9H0E7 712 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ALDH8A1Q9H2A2 487 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 BRF2Q9HAW0 419 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ERVK-5Q9HDB9 667 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 INTS13Q9NVM9 706 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 RPS6KA6Q9UK32 745 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF215Q9UL58 517 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 RCE1Q9Y256 329 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 DMRT1Q9Y5R6 373 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 NOX1Q9Y5S8 564 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 FPGT-TNNI3KV9GXZ4 949 aa4.22□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF213O14771 459 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 PLSCR1O15162 318 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 VILLO15195 856 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF185O15231 689 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SLC16A3O15427 465 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 RECQL4O94761 1208 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 APOA4P06727 396 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SPARCP09486 303 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 NFKBIAP25963 317 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 HIBADHP31937 336 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 RABGGTBP53611 331 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 NLRP5P59047 1200 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 CXADRP78310 365 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 DGCR2P98153 550 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ROR1Q01973 937 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 TDGQ13569 410 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 BECN1Q14457 450 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 NAA25Q14CX7 972 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZNF766Q5HY98 468 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 TEDDM1Q5T9Z0 273 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ARMC6Q6NXE6 501 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 WDR93Q6P2C0 686 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ACSM6Q6P461 480 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 MTHFD1LQ6UB35 978 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 CYP20A1Q6UW02 462 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 IKBIPQ70UQ0 350 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 HTR3DQ70Z44 454 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 GDF7Q7Z4P5 450 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 PRPF39Q86UA1 669 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 CAND1Q86VP6 1230 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SGMS1Q86VZ5 419 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ULK2Q8IYT8 1036 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 TMEM132CQ8N3T6 1108 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SRBD1Q8N5C6 995 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 RADILQ96JH8 1075 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 PLEKHG4BQ96PX9 1271 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 NR1H4Q96RI1 486 aaPredicted RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 YME1L1Q96TA2 773 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 HERC2P3Q9BVR0 1158 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 GPR87Q9BY21 358 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ACTRT3Q9BYD9 372 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 MROH8Q9H579 483 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 ZCCHC17Q9NP64 241 aaKnown RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 GIMAP2Q9UG22 337 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 CD207Q9UJ71 328 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 SARDHQ9UL12 918 aa4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 MAGED1Q9Y5V3 778 aaPredicted RBP4.21□□□□□ -1.73
TRAPPC13-208ENST00000505553 CCDC187A0A096LP49 1063 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 A1L4Q6 167 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 NPIPB15A6NHN6 443 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM90A7PA6NKC0 464 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM90A22PA8MWA6 464 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM90A12PA8MX19 464 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM90A23PA8MXZ1 464 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 TEX22C9J3V5 150 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 M0QZQ0 153 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 TRIM24O15164 1050 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PPM1DO15297 605 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 RAMP2O60895 175 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 RPS6KA4O75676 772 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 SEC14L2O76054 403 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 METTL18O95568 372 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 CFIP05156 583 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 ALADP13716 330 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 COX7A2P14406 83 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 ADRA1DP25100 572 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 ABCD1P33897 745 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 LIPAP38571 399 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 IGHMBP2P38935 993 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PSMB10P40306 273 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 EIF3BP55884 814 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 SNX16P57768 344 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 SUMO2P61956 95 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 RPL7AP62424 266 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDC16Q13042 620 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PLCB4Q15147 1175 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 GPR162Q16538 588 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 CYP2A13Q16696 494 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM187BQ17R55 369 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 DUSP28Q4G0W2 176 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 PDCD4Q53EL6 469 aaKnown RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 GPR139Q6DWJ6 353 aa4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM88Q6PEY1 159 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms