RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CTAGE3PQ8IX95 158 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 OR10T2Q8NGX3 314 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CCT6BQ92526 530 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CDK5RAP1Q96SZ6 601 aaKnown RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 COX16Q9P0S2 106 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 FKTNO75072 461 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 POLBP06746 335 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CCNCP24863 283 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 SLC5A3P53794 718 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
NFKB1-205ENST00000505458 NAPEPLDQ6IQ20 393 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 ZNF534Q76KX8 674 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 GDAP1Q8TB36 358 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 C1orf74Q96LT6 269 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
NFKB1-205ENST00000505458 CFAP73A6NFT4 308 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 COPEO14579 308 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 BANF1O75531 89 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 DCTN3O75935 186 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ATP5HO75947 161 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 EPHB2P29323 1055 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 KPNA1P52294 538 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 WASHC5Q12768 1159 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 MPP2Q14168 576 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ANO4Q32M45 955 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 KLHDC8BQ8IXV7 354 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 NUP93Q8N1F7 819 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 TAB3Q8N5C8 712 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PPM1NQ8N819 430 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 SPPL2BQ8TCT7 592 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ATP2A3Q93084 1043 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 LGMNQ99538 433 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PAAF1Q9BRP4 392 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 TBC1D13Q9NVG8 400 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 MYO16Q9Y6X6 1858 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 TNFRSF10BO14763 440 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 KLF11O14901 512 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 TADA2AO75478 443 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 DNAJC8O75937 253 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 CREB1P16220 341 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 SETDB1Q15047 1291 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ZNF567Q8N184 647 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 C4orf33Q8N1A6 199 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 NDRG1Q92597 394 aaKnown RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 CLIC5Q9NZA1 410 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 MOCS1Q9NZB8 636 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PCDHB7Q9Y5E2 793 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 USH1CQ9Y6N9 552 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 DNM1LO00429 736 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ANXA9O76027 345 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 ATP5BP06576 529 aaKnown RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PTPN3P26045 913 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 HADHAP40939 763 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 NEK3P51956 506 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PITX1P78337 314 aaPredicted RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 LVRNQ6Q4G3 990 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 CCDC91Q7Z6B0 441 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 IGDCC3Q8IVU1 814 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
NFKB1-205ENST00000505458 LRFN2Q9ULH4 789 aa11.63□□□□□ -0.55
NFKB1-205ENST00000505458 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 EDF1O60869 148 aaKnown RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 SPAG7O75391 227 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 GRK4P32298 578 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 MGAT5Q09328 741 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TEX44Q53QW1 395 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 FAXCQ5TGI0 409 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 LHX8Q68G74 356 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 GABPB2Q8TAK5 448 aaPredicted RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
NFKB1-205ENST00000505458 IL37Q9NZH6 218 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TXNDC16Q9P2K2 825 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TLR6Q9Y2C9 796 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 LRIG2O94898 1065 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TGDSO95455 350 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 C1QAP02745 245 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 DHRS4L1P0CG22 281 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 OR1G1P47890 313 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 CACNA2D1P54289 1103 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 CDK18Q07002 472 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 C10orf67Q8IYJ2 551 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 RXFP1Q9HBX9 757 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 SEPT10Q9P0V9 454 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 TRIM49D1C9J1S8 452 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 AOC2O75106 756 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 YY1P25490 414 aa11.62□□□□□ -0.55
NFKB1-205ENST00000505458 PSMB4P28070 264 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms