RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 CD59P13987 128 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 PRKCSHP14314 528 aaPredicted RBP23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 GGCXP38435 758 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 IRAK1P51617 712 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 SHC2P98077 582 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 BNC1Q01954 994 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 GRIK2Q13002 908 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 PTPN20Q4JDL3 420 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 VWA3BQ502W6 1294 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 PITRM1Q5JRX3 1037 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 SLC2A13Q96QE2 648 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 PRMT1Q99873 361 aaKnown RBP23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 NUP58Q9BVL2 599 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 NUP62CLQ9H1M0 184 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 NDST4Q9H3R1 872 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 FAM204AQ9H8W3 233 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 EIF2B4Q9UI10 523 aaKnown RBP23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 FHOD1Q9Y613 1164 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 PCNX2A6NKB5 2137 aa23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 KMT2BQ9UMN6 2715 aaPredicted RBP23.45■■□□□ 1.34
CDC42SE2-207ENST00000504701 OPHN1O60890 802 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 SIN3BO75182 1162 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 GJB3O75712 270 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 ATP5BP06576 529 aaKnown RBP23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 OXTRP30559 389 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 CDH18Q13634 790 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 WDR45BQ5MNZ6 344 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 OTUD1Q5VV17 481 aaPredicted RBP23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 OR6B2Q6IFH4 312 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 OLFML1Q6UWY5 402 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 DHX40Q8IX18 779 aaKnown RBP23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 SNX19Q92543 992 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 DDX50Q9BQ39 737 aaKnown RBP23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 TUBGCP2Q9BSJ2 902 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 IL21RQ9HBE5 538 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 TMEM131Q92545 1883 aa23.44■■□□□ 1.34
CDC42SE2-207ENST00000504701 TTC34A8MYJ7 566 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 TFE3P19532 575 aaPredicted RBP23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 STK19P49842 368 aaPredicted RBP23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 CENPCQ03188 943 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 LAYNQ6UX15 382 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 RABEPKQ7Z6M1 372 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 HDDC3Q8N4P3 179 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 CADM4Q8NFZ8 388 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 C1orf216Q8TAB5 229 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 BTN2A3PQ96KV6 586 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 FAM81BQ96LP2 452 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 IRX2Q9BZI1 471 aaPredicted RBP23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 DDIT4Q9NX09 232 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 SERGEFQ9UGK8 458 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 SLCO3A1Q9UIG8 710 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 ERVW-1Q9UQF0 538 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 PLXNA2O75051 1894 aa23.43■■□□□ 1.34
CDC42SE2-207ENST00000504701 TYW5A2RUC4 315 aaKnown RBP23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 KCNU1A8MYU2 1149 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 H0Y626 953 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 MZF1P28698 734 aaPredicted RBP23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 PTK2Q05397 1052 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 RAPGEF1Q13905 1077 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 E2F5Q15329 346 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 FAM71AQ8IYT1 594 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 OR52K2Q8NGK3 314 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 RPL10LQ96L21 214 aaKnown RBP23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 ANLNQ9NQW6 1124 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 LMBRD1Q9NUN5 540 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 DNAAF2Q9NVR5 837 aaKnown RBP23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 SUSD2Q9UGT4 822 aa23.42■■□□□ 1.34
CDC42SE2-207ENST00000504701 A0A1B0GTW7 788 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 SYPP08247 313 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 C7P10643 843 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 VAV1P15498 845 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 GNSP15586 552 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 CDK17Q00537 523 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 NME3Q13232 169 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 KCNJ12Q14500 433 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 DRAP1Q14919 205 aaPredicted RBP23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 ST3GAL2Q16842 350 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 C2CD6Q53TS8 623 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 C11orf57Q6ZUT1 292 aaPredicted RBP23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 ATP6V0D2Q8N8Y2 350 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 IGSF8Q969P0 613 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 TRIM62Q9BVG3 475 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 ASPMQ8IZT6 3477 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 CACNA1BQ00975 2339 aa23.41■■□□□ 1.34
CDC42SE2-207ENST00000504701 TP53BP1Q12888 1972 aaPredicted RBP23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 F5H5T6 163 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 PES1O00541 588 aaKnown RBP23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 BCAT2O15382 392 aaPredicted RBP23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 SH3BP5O60239 455 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 HSF2BPO75031 334 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 DNTTP04053 509 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 PDGFRAP16234 1089 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 ERCC5P28715 1186 aaPredicted RBP23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 KRT9P35527 623 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 KLK7P49862 253 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 HNRNPA1L2Q32P51 320 aaKnown RBP23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 EFHC1Q5JVL4 640 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 C9orf64Q5T6V5 341 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 TAF3Q5VWG9 929 aa23.4■■□□□ 1.34
CDC42SE2-207ENST00000504701 ZNF776Q68DI1 518 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms