RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 BTN2A3PQ96KV6 586 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 NCAPGQ9BPX3 1015 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 DDX50Q9BQ39 737 aaKnown RBP10.39□□□□□ -0.75
NUP54-203ENST00000504173 TKTL2Q9H0I9 626 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 RAB6CQ9H0N0 254 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 LINC00597Q9H2U6 94 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 KCNF1Q9H3M0 494 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 EBF3Q9H4W6 596 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 CACNA2D2Q9NY47 1150 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 LCMT1Q9UIC8 334 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
NUP54-203ENST00000504173 A0A0A6YYK5 440 aaPredicted RBP10.38□□□□□ -0.75
NUP54-203ENST00000504173 KCNU1A8MYU2 1149 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 PJA2O43164 708 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 PAGE1O75459 146 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 KCNK5O95279 499 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 NFATC1O95644 943 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 TDGF1P13385 188 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 ARSAP15289 507 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 CHKAP35790 457 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 NAP1L1P55209 391 aaKnown RBP10.38□□□□□ -0.75
NUP54-203ENST00000504173 PFKPQ01813 784 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 TNK2Q07912 1038 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 MESDQ14696 234 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 TCEAL1Q15170 157 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 EML3Q32P44 896 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 ARL13BQ3SXY8 428 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 CHSY1Q86X52 802 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 CPA6Q8N4T0 437 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 NIPA2Q8N8Q9 360 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 CSGALNACT1Q8TDX6 532 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 DNASE1L2Q92874 299 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 FAM83CQ9BQN1 747 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 TSGA10Q9BZW7 698 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 LACRTQ9GZZ8 138 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 ARHGEF38Q9NXL2 777 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 XPO7Q9UIA9 1087 aaKnown RBP10.38□□□□□ -0.75
NUP54-203ENST00000504173 MIA3Q5JRA6 1907 aa10.38□□□□□ -0.75
NUP54-203ENST00000504173 KIF26AQ9ULI4 1882 aaPredicted RBP10.38□□□□□ -0.75
NUP54-203ENST00000504173 FREM2Q5SZK8 3169 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 A0A0U1RQJ8 604 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 GOLGA6L7A0A1B0GV03 622 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 BTNL10A8MVZ5 291 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ARNTLO00327 626 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 BUB1O43683 1085 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PRPSAP2O60256 369 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 LRCH4O75427 683 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PROSCO94903 275 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ADH1CP00326 375 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CYBBP04839 570 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CYP17A1P05093 508 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 MIPP30301 263 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 MAN1A1P33908 653 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PCK1P35558 622 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ARHGAP25P42331 645 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
NUP54-203ENST00000504173 RPS9P46781 194 aaKnown RBP10.37□□□□□ -0.75
NUP54-203ENST00000504173 NRLP54845 237 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 HADHBP55084 474 aaKnown RBP10.37□□□□□ -0.75
NUP54-203ENST00000504173 NR1H3Q13133 447 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 RUNX3Q13761 415 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 DHCR24Q15392 516 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ITPRIPL2Q3MIP1 535 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 EFHC2Q5JST6 749 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ADGRF1Q5T601 910 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PIK3R6Q5UE93 754 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 DAB2IPQ5VWQ8 1189 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 RAP1GAP2Q684P5 730 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 NADSYN1Q6IA69 706 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 TPGS1Q6ZTW0 290 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 SLFN11Q7Z7L1 901 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 FAM217AQ8IXS0 508 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CPXM2Q8N436 756 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ARFGAP1Q8N6T3 406 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CCDC185Q8N715 623 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 NTAN1Q96AB6 310 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CLDN23Q96B33 292 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 CALR3Q96L12 384 aaKnown RBP10.37□□□□□ -0.75
NUP54-203ENST00000504173 SIK2Q9H0K1 926 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ECT2Q9H8V3 914 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 HPS4Q9NQG7 708 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 ANLNQ9NQW6 1124 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 TMPRSS4Q9NRS4 437 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 GTSE1Q9NYZ3 720 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 TRIM10Q9UDY6 481 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PCSK1NQ9UHG2 260 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 STOML2Q9UJZ1 356 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
NUP54-203ENST00000504173 MYO18BQ8IUG5 2567 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 USP9XQ93008 2570 aaPredicted RBP10.36□□□□□ -0.75
NUP54-203ENST00000504173 KALRNO60229 2985 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 MACROD2A1Z1Q3 448 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
NUP54-203ENST00000504173 F5H5T6 163 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 TRDMT1O14717 391 aaKnown RBP10.36□□□□□ -0.75
NUP54-203ENST00000504173 KRT86O43790 486 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 TSPAN3O60637 253 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 ADH5P11766 374 aa10.36□□□□□ -0.75
NUP54-203ENST00000504173 TACR2P21452 398 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms