RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 ANLNQ9NQW6 1124 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 PIGVQ9NUD9 493 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 GPATCH2LQ9NWQ4 482 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 DDIT4Q9NX09 232 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 CLIC5Q9NZA1 410 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 STRIP2Q9ULQ0 834 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 SH3BP1Q9Y3L3 701 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
NR1I3-219ENST00000504010 ANKRD62A6NC57 917 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 GIPC1O14908 333 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 CHADO15335 359 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SART1O43290 800 aaKnown RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ATG13O75143 517 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 RHOBTB1O94844 696 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 CYP1A2P05177 515 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 TMEM253P0C7T8 217 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 TNNT1P13805 278 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 TCF4P15884 667 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SPINK2P20155 84 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 PSMA2P25787 234 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 DDX6P26196 483 aaKnown RBP eCLIP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 NOS2P35228 1153 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 RDXP35241 583 aaKnown RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SSR1P43307 286 aaKnown RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SOX9P48436 509 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 USP4Q13107 963 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 MESDQ14696 234 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SPA17Q15506 151 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ELF2Q15723 593 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ZNF77Q15935 545 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 NAIF1Q69YI7 327 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 MSANTD2Q6P1R3 559 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 RFWD3Q6PCD5 774 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 TPGS1Q6ZTW0 290 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 KIAA1328Q86T90 577 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 YAF2Q8IY57 180 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 CCDC170Q8IYT3 715 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SLC35G2Q8TBE7 412 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 BPIFB1Q8TDL5 484 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 FAM172AQ8WUF8 416 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 P2RY11Q96G91 374 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 FCRL2Q96LA5 508 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-219ENST00000504010 NPY6RQ99463 290 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 LACRTQ9GZZ8 138 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 EBF3Q9H4W6 596 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 PARVAQ9NVD7 372 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ASNSD1Q9NWL6 643 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 WDR35Q9P2L0 1181 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 PCSK1NQ9UHG2 260 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 SALL4Q9UJQ4 1053 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ANAPC7Q9UJX3 599 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ARHGAP26Q9UNA1 814 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 CACNA1EQ15878 2313 aa9.39□□□□□ -0.91
NR1I3-219ENST00000504010 ASCC3Q8N3C0 2202 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 FAM221BA6H8Z2 402 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 EIF4E1BA6NMX2 242 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 H0Y626 953 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 I6L893 689 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 IRAK2O43187 625 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 GREM1O60565 184 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TRIM16O95361 564 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 GLI1P08151 1106 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 SDC4P31431 198 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 NOP2P46087 812 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TUBP50607 506 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 SGSHP51688 502 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 KPNA1P52294 538 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 CCINQ13939 588 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TRIP4Q15650 581 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TXNRD3NBQ6F5E7 133 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 NADSYN1Q6IA69 706 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 Q6ZS52 159 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PDZD3Q86UT5 571 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PROSER1Q86XN7 944 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PYROXD2Q8N2H3 581 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 CAMKK1Q8N5S9 505 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 ARFGAP1Q8N6T3 406 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 CCDC185Q8N715 623 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 ZNF564Q8TBZ8 553 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PEBP4Q96S96 227 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 SIK2Q9H0K1 926 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 TMEM9BQ9NQ34 198 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 OLA1Q9NTK5 396 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 DUS2Q9NX74 493 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PLK2Q9NYY3 685 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 GTSE1Q9NYZ3 720 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 AGO1Q9UL18 857 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 GPSM3Q9Y4H4 160 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 HELZP42694 1942 aaKnown RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 APC2O95996 2303 aa9.38□□□□□ -0.91
NR1I3-219ENST00000504010 NUP210Q8TEM1 1887 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-219ENST00000504010 SPTA1P02549 2419 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms