RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TRIM31Q9BZY9 425 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PHACTR1Q9C0D0 580 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 NKX2-4Q9H2Z4 354 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 ATXN3LQ9H3M9 355 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TLE6Q9H808 572 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 HAUS2Q9NVX0 235 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TMEM248Q9NWD8 314 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SAE1Q9UBE0 346 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 STOML2Q9UJZ1 356 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 TPX2Q9ULW0 747 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 NFU1Q9UMS0 254 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SHOC2Q9UQ13 582 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SSUH2Q9Y2M2 353 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 SNX24Q9Y343 169 aa8.37□□□□□ -1.07
TOPBP1-202ENST00000503338 PLXNA4Q9HCM2 1894 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ESYT3A0FGR9 886 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ZSCAN5CA6NGD5 496 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ARHGAP42A6NI28 874 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 DNALI1O14645 258 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 CCL16O15467 120 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 KCNN4O15554 427 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 MFSD11O43934 449 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 OPHN1O60890 802 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GCATO75600 419 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 STC2O76061 302 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 RHOP08100 348 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 HMBSP08397 361 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TACR2P21452 398 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 CCNCP24863 283 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 CORO1AP31146 461 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 IRS1P35568 1242 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 FDFT1P37268 417 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ETFBP38117 255 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GARSP41250 739 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TNNT3P45378 269 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 RPL21P46778 160 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 PLTPP55058 493 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 YBEYP58557 167 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 PPIDQ08752 370 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GALNT2Q10471 571 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GPS1Q13098 491 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GPS2Q13227 327 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 DUSP6Q16828 381 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ANO4Q32M45 955 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ADGRF1Q5T601 910 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 IZUMO3Q5VZ72 239 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 FBXL22Q6P050 247 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 GAREM2Q75VX8 874 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TMEM150AQ86TG1 271 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 PPIL6Q8IXY8 311 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF683Q8IZ20 524 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 UMODL1-AS1Q8N2C9 162 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 MREGQ8N565 214 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM71DQ8N9W8 422 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 CCNYQ8ND76 341 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ARNTL2Q8WYA1 636 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 FATE1Q969F0 183 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 MRPL38Q96DV4 380 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 RPRD1AQ96P16 312 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TSGA13Q96PP4 275 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 PRMT1Q99873 361 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM118BQ9BPY3 351 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 CORO1BQ9BR76 489 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 KLC2Q9H0B6 622 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TASP1Q9H6P5 420 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 SFXN1Q9H9B4 322 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 USP29Q9HBJ7 922 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TRPC7Q9HCX4 862 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF334Q9HCZ1 680 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TMPRSS4Q9NRS4 437 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ETNK2Q9NVF9 386 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 ANAPC5Q9UJX4 755 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 TRHDEQ9UKU6 1024 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 NEU3Q9UQ49 428 aa8.36□□□□□ -1.07
TOPBP1-202ENST00000503338 A0A0A0MRY4 1105 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 GOLGA6CA6NDK9 693 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 GOLGA6BA6NDN3 693 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 H0YGN5 161 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CHADO15335 359 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 EIF3HO15372 352 aaKnown RBP eCLIP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CLDN11O75508 207 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CKMP06732 381 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 GOLGA6DP0CG33 693 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 MYL4P12829 197 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 TCF3P15923 654 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 IVDP26440 423 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 RBL1P28749 1068 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 WEE1P30291 646 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CHKAP35790 457 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 AVPR1AP37288 418 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 PBX2P40425 430 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms