RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TFB1MQ8WVM0 346 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 NTAN1Q96AB6 310 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 PAFAH2Q99487 392 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 NSRP1Q9H0G5 558 aaKnown RBP11.92□□□□□ -0.5
USP46-204ENST00000503060 DSEQ9UL01 958 aa11.92□□□□□ -0.5
USP46-204ENST00000503060 A0A0B4J203 849 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 PRPF4O43172 522 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP46-204ENST00000503060 AVILO75366 819 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 SPAG7O75391 227 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 SPAG6O75602 509 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 LTFP02788 710 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 APRTP07741 180 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 VAV1P15498 845 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 STX2P32856 288 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 ADRA1BP35368 520 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 AIF1P55008 147 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 FIP1L1Q6UN15 594 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 CCDC80Q76M96 950 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 BHLHA9Q7RTU4 235 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 YTHDF3Q7Z739 585 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 PIGWQ7Z7B1 504 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 CAND1Q86VP6 1230 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 VPS52Q8N1B4 723 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 AGGF1Q8N302 714 aaeCLIP11.91□□□□□ -0.5
USP46-204ENST00000503060 GDAP1Q8TB36 358 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 ADAM32Q8TC27 787 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 HASPINQ8TF76 798 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 HTR3CQ8WXA8 447 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 CABS1Q96KC9 395 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 CYTH2Q99418 400 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 KIF9Q9HAQ2 790 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 WDR6Q9NNW5 1121 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 SF3B1O75533 1304 aaKnown RBP eCLIP11.91□□□□□ -0.54e-7■■■■■ 133.7
USP46-204ENST00000503060 TCP11X1B4DZS4 312 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 INPPL1O15357 1258 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 NCAM1P13591 858 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 TPSB2P20231 275 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 MSH2P43246 934 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 SLC18A1P54219 525 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 YWHAGP61981 247 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP46-204ENST00000503060 SCAPQ12770 1279 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 TPSAB1Q15661 275 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 FAM133BQ5BKY9 247 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 DCLRE1AQ6PJP8 1040 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 DCLK2Q8N568 766 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 CCDC197Q8NCU1 140 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 PKMYT1Q99640 499 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 OSBPL2Q9H1P3 480 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 TMLHEQ9NVH6 421 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 ZNF69Q9UC07 566 aa11.91□□□□□ -0.5
USP46-204ENST00000503060 SMG5Q9UPR3 1016 aaKnown RBP11.91□□□□□ -0.5
USP46-204ENST00000503060 A0A1W2PPM1 405 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 TCRBV9S1A1TA0A576 114 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 PIAS1O75925 651 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 CTHP32929 405 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 RPS6KA3P51812 740 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 WDR4P57081 412 aaKnown RBP11.9□□□□□ -0.5
USP46-204ENST00000503060 DPYSQ14117 519 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
USP46-204ENST00000503060 OVOS1Q6IE37 1185 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 RFX8Q6ZV50 586 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 C4orf33Q8N1A6 199 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 OR10T2Q8NGX3 314 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 CD99L2Q8TCZ2 262 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 DENND1AQ8TEH3 1009 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 IPCEF1Q8WWN9 437 aaPredicted RBP11.9□□□□□ -0.5
USP46-204ENST00000503060 IRGQQ8WZA9 623 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 CFAP36Q96G28 342 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 MAGEB18Q96M61 343 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 LGMNQ99538 433 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 A0A0A0MRY4 1105 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 DCLK1O15075 740 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 B3GALNT1O75752 331 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 ITGB1P05556 798 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 CKBP12277 381 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 YY1P25490 414 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 SEMA5AQ13591 1074 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 PRKD1Q15139 912 aaPredicted RBP11.9□□□□□ -0.5
USP46-204ENST00000503060 PM20D1Q6GTS8 502 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 C10orf67Q8IYJ2 551 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 THEM5Q8N1Q8 247 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 MZB1Q8WU39 189 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 ANKRD49Q8WVL7 239 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 SUSD3Q96L08 255 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 CAPNS2Q96L46 248 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 GLT1D1Q96MS3 346 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 SPATA13Q96N96 652 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 TMEM209Q96SK2 561 aa11.9□□□□□ -0.5
USP46-204ENST00000503060 ELAC2Q9BQ52 826 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms