RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 URB1O60287 2271 aaKnown RBP5.4□□□□□ -1.55
HTT-202ENST00000502820 MTCL1Q9Y4B5 1905 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 A0A0B4J269 797 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TTC26A0AVF1 554 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 BLACEA4D250 179 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 FAM47DPA6NHR8 397 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 LGALS16A8MUM7 142 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 WASH3PC4AMC7 463 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 E7EVH7 732 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 E9PAM4 449 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 H0YCG3 227 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 LEFTY2O00292 366 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PPEF2O14830 753 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TRIM24O15164 1050 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SART1O43290 800 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
HTT-202ENST00000502820 ATP5HO75947 161 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 LCA5LO95447 670 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ADH1CP00326 375 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CYP17A1P05093 508 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ADRB2P07550 413 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CSH1P0DML2 217 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CSH2P0DML3 217 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CXCL8P10145 99 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 HAPLN1P10915 354 aaPredicted RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 IMPDH2P12268 514 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 IDEP14735 1019 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PAX7P23759 505 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 GRIK1P39086 918 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TNFRSF4P43489 277 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 KIR2DL1P43626 348 aaPredicted RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 SCTRP47872 440 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CCT8P50990 548 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 COPB1P53618 953 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 UCNP55089 124 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 C21orf59P57076 290 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 MRPS25P82663 173 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 GTF2BQ00403 316 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TLE1Q04724 770 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SFSWAPQ12872 951 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 STRN3Q13033 797 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PAK1Q13153 545 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PDCLQ13371 301 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 MYBPC2Q14324 1141 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TEAD4Q15561 434 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ZBTB6Q15916 424 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 COBLL1Q53SF7 1204 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TTMPQ5BVD1 217 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SH2D4BQ5SQS7 431 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 EGFLAMQ63HQ2 1017 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SLC39A4Q6P5W5 647 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CCDC81Q6ZN84 652 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 GPBP1Q86WP2 473 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 RBM12BQ8IXT5 1001 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SPATA4Q8NEY3 305 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SNIP1Q8TAD8 396 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 SCFD1Q8WVM8 642 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CALML4Q96GE6 196 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 EPSTI1Q96J88 318 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SENP8Q96LD8 212 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 RAB3IPQ96QF0 476 aaPredicted RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 MMS19Q96T76 1030 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 STRA6Q9BX79 667 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 NRSN2Q9GZP1 204 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 FAM192AQ9GZU8 254 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 OSBPL2Q9H1P3 480 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 VCXQ9H320 206 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CUEDC2Q9H467 287 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ST6GALNAC4Q9H4F1 302 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PLEKHA5Q9HAU0 1116 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PARVGQ9HBI0 331 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CD248Q9HCU0 757 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SAMD15Q9P1V8 674 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CFAP97Q9P2B7 532 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 DEC1Q9P2X7 70 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 UXTQ9UBK9 157 aaPredicted RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 SLC12A6Q9UHW9 1150 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ZMYM5Q9UJ78 669 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 TPX2Q9ULW0 747 aaKnown RBP5.39□□□□□ -1.55
HTT-202ENST00000502820 SLC12A4Q9UP95 1085 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CLCA2Q9UQC9 943 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ANKRD6Q9Y2G4 727 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 PCDHB5Q9Y5E4 795 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 CACNA1EQ15878 2313 aa5.39□□□□□ -1.55
HTT-202ENST00000502820 ABCA7Q8IZY2 2146 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 A0A087X0B3 334 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 SSU72P8A0A1W2PR75 194 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 BICDL2A1A5D9 508 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 FRMD3A2A2Y4 597 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 LRRD1A4D1F6 860 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 H0Y8X5 98 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 CCDC188H7C350 402 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 M0QZQ0 153 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 CYB561D2O14569 222 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 OGTO15294 1046 aa5.38□□□□□ -1.55
HTT-202ENST00000502820 CLDN3O15551 220 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms