RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 C2orf15Q8WU43 125 aaKnown RBP5.88□□□□□ -1.47
SPTA1-209ENST00000498708 DNASE2BQ8WZ79 361 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 LARP4BQ92615 738 aaKnown RBP5.88□□□□□ -1.47
SPTA1-209ENST00000498708 ATP2A3Q93084 1043 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 EPSTI1Q96J88 318 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 HIC2Q96JB3 615 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 ZNF560Q96MR9 790 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 OSBPL1AQ9BXW6 950 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 MIR1-1HGQ9H1L0 117 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 SLC6A17Q9H1V8 727 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 KIF9Q9HAQ2 790 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 FOXD3Q9UJU5 478 aaPredicted RBP5.88□□□□□ -1.47
SPTA1-209ENST00000498708 SMC3Q9UQE7 1217 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 DERAQ9Y315 318 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 C2CD2Q9Y426 696 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 KIF3AQ9Y496 699 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 SLCO1B1Q9Y6L6 691 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 FBN3Q75N90 2809 aa5.88□□□□□ -1.47
SPTA1-209ENST00000498708 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 TRAV19A0A0A6YYK7 116 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 A0A1B0GVT2 93 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 A0A1W2PQF6 199 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 NDUFS2O75306 463 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 NOL4O94818 638 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 PRPF6O94906 941 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 KAT7O95251 611 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 GCNT3O95395 438 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 PDGFRBP09619 1106 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 USP17L7P0C7H9 530 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 TMEM191BP0C7N4 346 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 FOSL1P15407 271 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 HDCP19113 662 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 BDNFP23560 247 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 DDX6P26196 483 aaKnown RBP eCLIP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 LONP1P36776 959 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 GRK6P43250 576 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ZNF131P52739 623 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 UCNP55089 124 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 RPL10AP62906 217 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 IL9RQ01113 521 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 CYP27A1Q02318 531 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 TLE1Q04724 770 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ZNF268Q14587 947 aaPredicted RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 KCNB1Q14721 858 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 IGFBP7Q16270 282 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 NFE2Q16621 373 aaPredicted RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 KIF19Q2TAC6 998 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 LINC00303Q3SY05 128 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 WDR45BQ5MNZ6 344 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ARL6IP4Q66PJ3 421 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 FAM173BQ6P4H8 233 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ZNF720Q7Z2F6 126 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 C12orf40Q86WS4 652 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ADGRF2Q8IZF7 708 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 SYCP3Q8IZU3 236 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 MYLPFQ96A32 169 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 AK8Q96MA6 479 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 CLIC6Q96NY7 704 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 ACCSQ96QU6 501 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 TSPAN18Q96SJ8 248 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 CBWD1Q9BRT8 395 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 FGFBP2Q9BYJ0 223 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 MRPL44Q9H9J2 332 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 PDE11AQ9HCR9 933 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 CD248Q9HCU0 757 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 STARD5Q9NSY2 213 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 SMPD4Q9NXE4 827 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 RBAKQ9NYW8 714 aaPredicted RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 HSFX1Q9UBD0 423 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 FTSJ1Q9UET6 329 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 R3HCC1Q9Y3T6 440 aaKnown RBP5.87□□□□□ -1.47
SPTA1-209ENST00000498708 SNX11Q9Y5W9 270 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 CLIC4Q9Y696 253 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 SCN1AP35498 2009 aa5.87□□□□□ -1.47
SPTA1-209ENST00000498708 TCHHQ07283 1943 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 MYMKA6NI61 221 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 K7ENP7 123 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 LEFTY2O00292 366 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 ENC1O14682 589 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 BCAT2O15382 392 aaPredicted RBP5.86□□□□□ -1.47
SPTA1-209ENST00000498708 ZNF217O75362 1048 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 IL18RAPO95256 599 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 PTMAP06454 111 aaKnown RBP5.86□□□□□ -1.47
SPTA1-209ENST00000498708 PTMSP20962 102 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 PAX3P23760 479 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 LMO2P25791 158 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 ANXA13P27216 316 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 PNPLA4P41247 253 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 CSNK1EP49674 416 aaKnown RBP5.86□□□□□ -1.47
SPTA1-209ENST00000498708 CASP5P51878 434 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 ZXDBP98169 803 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 KDSRQ06136 332 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 SMARCB1Q12824 385 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 POSTNQ15063 836 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 RABEP1Q15276 862 aa5.86□□□□□ -1.47
SPTA1-209ENST00000498708 HSF5Q4G112 596 aaPredicted RBP5.86□□□□□ -1.47
SPTA1-209ENST00000498708 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
SPTA1-209ENST00000498708 RRAGBQ5VZM2 374 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms