RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CHTF18Q8WVB6 975 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 TCP11Q8WWU5 503 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 STARD8Q92502 1023 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 FRAT1Q92837 279 aaPredicted RBP4.97□□□□□ -1.61
CSTF1-207ENST00000498689 PTPRN2Q92932 1015 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 FAM227BQ96M60 508 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 CDH19Q9H159 772 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 RNF41Q9H4P4 317 aaPredicted RBP4.97□□□□□ -1.61
CSTF1-207ENST00000498689 GPN2Q9H9Y4 310 aaPredicted RBP4.97□□□□□ -1.61
CSTF1-207ENST00000498689 RIC8AQ9NPQ8 531 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 ARHGAP20Q9P2F6 1191 aa4.97□□□□□ -1.61
CSTF1-207ENST00000498689 RCOR3Q9P2K3 495 aaPredicted RBP4.97□□□□□ -1.61
CSTF1-207ENST00000498689 SEC63Q9UGP8 760 aaKnown RBP4.97□□□□□ -1.61
CSTF1-207ENST00000498689 ESPNB1AK53 854 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 HIP1O00291 1037 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 EML1O00423 815 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 RAD1O60671 282 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 GAS7O60861 476 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 PRPF40AO75400 957 aaKnown RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 MAP3K6O95382 1288 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 OLFM2O95897 454 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 LIG1P18858 919 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 GUCY2CP25092 1073 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 SFNP31947 248 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 ARL2P36404 184 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 RFC5P40937 340 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 AARSP49588 968 aaKnown RBP eCLIP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 PGDP52209 483 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 PMS2P54278 862 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 SETQ01105 290 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 POU5F1BQ06416 359 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 TFDP1Q14186 410 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 MXD4Q14582 209 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 TMEM132AQ24JP5 1023 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 PLEKHN1Q494U1 663 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 CPZQ66K79 652 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 TMEM215Q68D42 235 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 WWC2Q6AWC2 1192 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 NAPEPLDQ6IQ20 393 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 ZCCHC8Q6NZY4 707 aaKnown RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 CRELD2Q6UXH1 353 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 DSTYKQ6XUX3 929 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 CEP97Q8IW35 865 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 CIARTQ8N365 385 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 SPPL2BQ8TCT7 592 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 SLC5A5Q92911 643 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 GFM1Q96RP9 751 aaKnown RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 BBS2Q9BXC9 721 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 NFKBIZQ9BYH8 718 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 NEUROG2Q9H2A3 272 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 SLC38A7Q9NVC3 462 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 UXTQ9UBK9 157 aaPredicted RBP4.96□□□□□ -1.62
CSTF1-207ENST00000498689 B3GALT1Q9Y5Z6 326 aa4.96□□□□□ -1.62
CSTF1-207ENST00000498689 USF3Q68DE3 2245 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 A0A1W2PP55 124 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 LRRIQ4A6NIV6 560 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 PSMD10O75832 226 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 FOSP01100 380 aaPredicted RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 DNTTP04053 509 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 RPLP0P05388 317 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 IRF1P10914 325 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 MBL2P11226 248 aaPredicted RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 RLBP1P12271 317 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 KCNE1P15382 129 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 PDCP20941 246 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 ZNF132P52740 706 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 COPB1P53618 953 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 ZFP36L1Q07352 338 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 EHHADHQ08426 723 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 CHAF1BQ13112 559 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 PRPF4BQ13523 1007 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 ERV3-1Q14264 604 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 NR0B2Q15466 257 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 KRTAP24-1Q3LI83 254 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 SLC45A4Q5BKX6 768 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 NT5DC1Q5TFE4 455 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 BHLHB9Q6PI77 547 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 SERPINA13PQ6UXR4 307 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 MRGPRGQ86SM5 289 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 SLC22A18ASQ8N1D0 253 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 SDR16C5Q8N3Y7 309 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 FSIP1Q8NA03 581 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 ZNF548Q8NEK5 533 aaPredicted RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 GANCQ8TET4 914 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 GTF3C6Q969F1 213 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 RNF31Q96EP0 1072 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 NOX5Q96PH1 765 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 MYOCQ99972 504 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 TEKT3Q9BXF9 490 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 INTS2Q9H0H0 1204 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 NUCKS1Q9H1E3 243 aaKnown RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 MLXIPLQ9NP71 852 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 PRSS16Q9NQE7 514 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 PRMT7Q9NVM4 692 aaPredicted RBP4.95□□□□□ -1.62
CSTF1-207ENST00000498689 KLHL11Q9NVR0 708 aa4.95□□□□□ -1.62
CSTF1-207ENST00000498689 FBXL12Q9NXK8 326 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms