RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 SIX1Q15475 284 aaPredicted RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 HABP4Q5JVS0 413 aaKnown RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 ADGRF1Q5T601 910 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 RAP1GAP2Q684P5 730 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 LRRC31Q6UY01 552 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 EP400NLQ6ZTU2 488 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 C14orf80Q86SX3 495 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 CTAGE6Q86UF2 777 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 ARID3BQ8IVW6 561 aaPredicted RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 CTAGE4Q8IX94 777 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 PQLC3Q8N755 202 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 SMRP1Q8NCR6 262 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 ZSCAN18Q8TBC5 510 aaPredicted RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 MYLIPQ8WY64 445 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 FGF13Q92913 245 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 ZSWIM3Q96MP5 696 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 CDX2Q99626 313 aaPredicted RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 CARD6Q9BX69 1037 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 SMG9Q9H0W8 520 aaKnown RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 STIM2Q9P246 746 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 CD207Q9UJ71 328 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 AGO1Q9UL18 857 aaKnown RBP12.03□□□□□ -0.48
SCG5-209ENST00000498607 CDH7Q9ULB5 785 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 SH3BP1Q9Y3L3 701 aa12.03□□□□□ -0.48
SCG5-209ENST00000498607 KIF26AQ9ULI4 1882 aaPredicted RBP12.02□□□□□ -0.48
SCG5-209ENST00000498607 CCDC188H7C350 402 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 APOC4-APOC2K7ER74 178 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 DCLK1O15075 740 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 FGF10O15520 208 aaPredicted RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 APOC2P02655 101 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 ERCC2P18074 760 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 AMPD1P23109 780 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 EPHB2P29323 1055 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 SLC6A4P31645 630 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 DYNLT1P63172 113 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 CBX2Q14781 532 aaPredicted RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 ZNF77Q15935 545 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 CYP1B1Q16678 543 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 C5orf22Q49AR2 442 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 RWDD4Q6NW29 188 aaKnown RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 FBXL22Q6P050 247 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 Q7L0L9 218 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 FAM217AQ8IXS0 508 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 ZDHHC14Q8IZN3 488 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 LGI2Q8N0V4 545 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 CELF5Q8N6W0 485 aaKnown RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 PLD5Q8N7P1 536 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 SPATA4Q8NEY3 305 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 SMARCD2Q92925 531 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 NECTIN4Q96NY8 510 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 AP1M1Q9BXS5 423 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 CATSPERBQ9H7T0 1116 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 TRPV4Q9HBA0 871 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 HOMER3Q9NSC5 361 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 PPARGC1AQ9UBK2 798 aaKnown RBP12.02□□□□□ -0.49
SCG5-209ENST00000498607 VANGL2Q9ULK5 521 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 CCL26Q9Y258 94 aa12.02□□□□□ -0.49
SCG5-209ENST00000498607 GOLGA6L7A0A1B0GV03 622 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 DRGXA6NNA5 263 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 WASH4PA8MWX3 477 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 GFRA2O00451 464 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 PHF2O75151 1096 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 SLU7O95391 586 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 PAFAH1B3Q15102 231 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 FAM78AQ5JUQ0 283 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 RABGAP1LQ5R372 815 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 TTC39BQ5VTQ0 682 aaPredicted RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 NCBP2-AS2Q69YL0 99 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 TMCO3Q6UWJ1 677 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 BBS7Q8IWZ6 715 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 CPXM2Q8N436 756 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 DEFB123Q8N688 67 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 RTL3Q8N8U3 475 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 PRELID2Q8N945 189 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 SUSD6Q92537 303 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 ASB16Q96NS5 453 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 GUCD1Q96NT3 240 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 RPRD1AQ96P16 312 aaPredicted RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 MYADMQ96S97 322 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 ZYG11BQ9C0D3 744 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 POMKQ9H5K3 350 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 RETREG1Q9H6L5 497 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 RBM12Q9NTZ6 932 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 ETNK2Q9NVF9 386 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 DONSONQ9NYP3 566 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 R3HDM2Q9Y2K5 976 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 NR2E1Q9Y466 385 aa12.01□□□□□ -0.49
SCG5-209ENST00000498607 USP15Q9Y4E8 981 aaPredicted RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 LAMA2P24043 3122 aaKnown RBP12.01□□□□□ -0.49
SCG5-209ENST00000498607 NUP205Q92621 2012 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms