RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 NUCB2P80303 420 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 CCDC40Q4G0X9 1142 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 USP30Q70CQ3 517 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 GALNT15Q8N3T1 639 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 UBR7Q8N806 425 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 HJURPQ8NCD3 748 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-211ENST00000498534 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 TTC17Q96AE7 1141 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-211ENST00000498534 MIS12Q9H081 205 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-211ENST00000498534 FBXL12Q9NXK8 326 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CNOT4-211ENST00000498534 NUMA1Q14980 2115 aa12.49□□□□□ -0.41
CNOT4-211ENST00000498534 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 FREM2Q5SZK8 3169 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 FAM47DPA6NHR8 397 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 KCNK3O14649 394 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 TNFSF14O43557 240 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 MOCS3O95396 460 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 SLC6A4P31645 630 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 PPP1R2P41236 205 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 SGSHP51688 502 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 COL9A2Q14055 689 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 INAVAQ3KP66 663 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 FAM133BQ5BKY9 247 aaKnown RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 KIAA0895LQ68EN5 471 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 CARNMT1Q8N4J0 409 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 KDM1BQ8NB78 822 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 BAHD1Q8TBE0 780 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 SERPINB11Q96P15 392 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 OMDQ99983 421 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 TRIM62Q9BVG3 475 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 ACE2Q9BYF1 805 aaPredicted RBP12.48□□□□□ -0.41
CNOT4-211ENST00000498534 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 CEP83Q9Y592 693 aa12.48□□□□□ -0.41
CNOT4-211ENST00000498534 TARSL2A2RTX5 802 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 TRIM49BA6NDI0 452 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 LRRC72A6NJI9 287 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 CAPN9O14815 690 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 P4HA2O15460 535 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 PCDHGA12O60330 932 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 SIN3BO75182 1162 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 BRD2P25440 801 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 NNMTP40261 264 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 CSKP41240 450 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 ACADSBP45954 432 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 CCT8P50990 548 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 GALCP54803 685 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 RPS24P62847 133 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 RACK1P63244 317 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 CDH18Q13634 790 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 RNF219Q5W0B1 726 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 C19orf48Q6RUI8 117 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 RRAGAQ7L523 313 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 WFDC5Q8TCV5 224 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 FAM149B1Q96BN6 582 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 PABPC3Q9H361 631 aaKnown RBP12.47□□□□□ -0.41
CNOT4-211ENST00000498534 ST7Q9NRC1 585 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 SLC12A6Q9UHW9 1150 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 SLCO1B1Q9Y6L6 691 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 BAHCC1Q9P281 2608 aa12.47□□□□□ -0.41
CNOT4-211ENST00000498534 ACACAQ13085 2346 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 GOLGA4Q13439 2230 aaKnown RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ITPR1Q14643 2758 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 H0Y8X5 98 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 VILLO15195 856 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 RNASEH2AO75792 299 aaKnown RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 APOEP02649 317 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 SRPRAP08240 638 aaKnown RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 SLC8A1P32418 973 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 CTSKP43235 329 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ECT2LQ008S8 904 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 NNTQ13423 1086 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 CST6Q15828 149 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 CCDC157Q569K6 752 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 MS4A13Q5J8X5 152 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ISM2Q6H9L7 571 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 NADSYN1Q6IA69 706 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 MMAAQ8IVH4 418 aaKnown RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 CFAP52Q8N1V2 620 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 MDM1Q8TC05 714 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 DQX1Q8TE96 717 aaKnown RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 CLEC4CQ8WTT0 213 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ERCC4Q92889 916 aaPredicted RBP12.46□□□□□ -0.41
CNOT4-211ENST00000498534 LMLNQ96KR4 655 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
CNOT4-211ENST00000498534 MTG2Q9H4K7 406 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms