RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 KLF6Q99612 283 aaPredicted RBP12.8□□□□□ -0.36
AFF3-215ENST00000498090 STN1Q9H668 368 aaKnown RBP12.8□□□□□ -0.36
AFF3-215ENST00000498090 PAPSS1O43252 624 aaPredicted RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 RFPL1O75677 317 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 EOMESO95936 686 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 ACRP10323 421 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 ESRRAP11474 423 aaPredicted RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 BGNP21810 368 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 L1CAMP32004 1257 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 GATMP50440 423 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 EFHC1Q5JVL4 640 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 STEAP4Q687X5 459 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 C4orf50Q6ZRC1 276 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 CRLF3Q8IUI8 442 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 APLFQ8IW19 511 aaPredicted RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 CRYBG2Q8N1P7 616 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.36
AFF3-215ENST00000498090 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 MCUR1Q96AQ8 359 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 SIGLEC10Q96LC7 697 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 HTATIP2Q9BUP3 242 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 ELAC1Q9H777 363 aaKnown RBP12.79□□□□□ -0.36
AFF3-215ENST00000498090 TMEM161AQ9NX61 479 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 INPP5FQ9Y2H2 1132 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
AFF3-215ENST00000498090 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 GSC2O15499 205 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 B4GALT3O60512 393 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 MAGEC1O60732 1142 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 AVILO75366 819 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 GRAP2O75791 330 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 POMCP01189 267 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
AFF3-215ENST00000498090 SERPINB3P29508 390 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 ARL4AP40617 200 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 RGS7P49802 495 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 TMPRSS15P98073 1019 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 OVGP1Q12889 678 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 NAA25Q14CX7 972 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 TAF11Q15544 211 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 C9orf57Q5W0N0 161 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 ACOT1Q86TX2 421 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 NUDCD3Q8IVD9 361 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 TMEM199Q8N511 208 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 TFB1MQ8WVM0 346 aaKnown RBP12.78□□□□□ -0.36
AFF3-215ENST00000498090 DPF3Q92784 378 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 NAF1Q96HR8 494 aaKnown RBP12.78□□□□□ -0.36
AFF3-215ENST00000498090 ZNF560Q96MR9 790 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 ZNF570Q96NI8 536 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 DENND2DQ9H6A0 471 aaPredicted RBP12.78□□□□□ -0.36
AFF3-215ENST00000498090 MOCS1Q9NZB8 636 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 AP4E1Q9UPM8 1137 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
AFF3-215ENST00000498090 A0A0A0MRY4 1105 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 PIRO00625 290 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 OPHN1O60890 802 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 THP07101 528 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 MYL2P10916 166 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 LRPAP1P30533 357 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 OCRLQ01968 901 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 WASHC5Q12768 1159 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 DNAL1Q4LDG9 190 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 FAM43BQ6ZT52 329 aaPredicted RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 MARK2Q7KZI7 788 aaKnown RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 TMPRSS6Q8IU80 811 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 SCUBE3Q8IX30 993 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 LMNTD2Q8IXW0 634 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 C12orf29Q8N999 325 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 CCDC110Q8TBZ0 833 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 BADQ92934 168 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 PIWIL1Q96J94 861 aaKnown RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 SPATA13Q96N96 652 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 CSPG4P5Q96PW8 444 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 CADM1Q9BY67 442 aaKnown RBP12.77□□□□□ -0.36
AFF3-215ENST00000498090 THAP1Q9NVV9 213 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 DONSONQ9NYP3 566 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.77□□□□□ -0.36
AFF3-215ENST00000498090 TRIP11Q15643 1979 aa12.77□□□□□ -0.36
AFF3-215ENST00000498090 MICAL3Q7RTP6 2002 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 SDR42E2A6NKP2 422 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 F8W8V4 182 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 FCHO1O14526 889 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 SPTLC1O15269 473 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 SNNO75324 88 aaPredicted RBP12.77□□□□□ -0.37
AFF3-215ENST00000498090 DGKIO75912 1065 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 BPGMP07738 259 aa12.77□□□□□ -0.37
AFF3-215ENST00000498090 ACADSP16219 412 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms