RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 LHX6Q9UPM6 363 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 NFS1Q9Y697 457 aa8.32□□□□□ -1.08
PDZRN3-212ENST00000498048 A0A087WUV0 522 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TCRBV7S3A2A0A539 114 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 E7EVH7 732 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PRRG1O14668 218 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 NCAM2O15394 837 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TLR5O60602 858 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 OPHN1O60890 802 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 BANF1O75531 89 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TTC4O95801 387 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CSH1P0DML2 217 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CSH2P0DML3 217 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TPSB2P20231 275 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MX2P20592 715 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 FDFT1P37268 417 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MAGEA4P43358 317 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 LMAN1P49257 510 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TUFMP49411 452 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 GYS2P54840 703 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 COG7P83436 770 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 NRG1Q02297 640 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 GAD2Q05329 585 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PPIDQ08752 370 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 GALNT2Q10471 571 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 EIF4EBP2Q13542 120 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC29A2Q14542 456 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 FASTKD3Q14CZ7 662 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TPSAB1Q15661 275 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PIK3R6Q5UE93 754 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MANEALQ5VSG8 457 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TPGS2Q68CL5 300 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 KCTD16Q68DU8 428 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 TADA2BQ86TJ2 420 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 DDX53Q86TM3 631 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CHSY1Q86X52 802 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MIB1Q86YT6 1006 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 RELL1Q8IUW5 271 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CCDC13Q8IYE1 715 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PDIK1LQ8N165 341 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 FIBCD1Q8N539 461 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 NETO2Q8NC67 525 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CCNYQ8ND76 341 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 OVCA2Q8WZ82 227 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 EXOC4Q96A65 974 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 HAPLN3Q96S86 360 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 LGMNQ99538 433 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CLSTN3Q9BQT9 956 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 FRMD8Q9BZ67 464 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MCOLN1Q9GZU1 580 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 NACA2Q9H009 215 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 STMN4Q9H169 189 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 ZBP1Q9H171 429 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 OSBPL2Q9H1P3 480 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PRDM12Q9H4Q4 367 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 VPS37BQ9H9H4 285 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CYP4F11Q9HBI6 524 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 USP29Q9HBJ7 922 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 MARCH2Q9P0N8 246 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 KLHL8Q9P2G9 620 aaPredicted RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 HSFX1Q9UBD0 423 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 CHMP2BQ9UQN3 213 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PCDHB12Q9Y5F1 795 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 HS3ST4Q9Y661 456 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 DENND4AQ7Z401 1863 aa8.31□□□□□ -1.08
PDZRN3-212ENST00000498048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 EXOC1LA0A1B0GW35 172 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC12A8A0AV02 714 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 C5orf60A6NFR6 353 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 E7ESA3 106 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 E9PAM4 449 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 F5H423 210 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 DFFAO00273 331 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 RASGRF2O14827 1237 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 RGS16O15492 202 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 MTSS1O43312 755 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 MAP3K7O43318 606 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 GCATO75600 419 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 GJB5O95377 273 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SEC24AO95486 1093 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 APRTP07741 180 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 HMBSP08397 361 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SRGAP2BP0DMP2 458 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 PSMB4P28070 264 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ELF1P32519 619 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 HPDP32754 393 aaPredicted RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 PHBP35232 272 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 GARSP41250 739 aaKnown RBP8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 MAGEA6P43360 314 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SLCO1A2P46721 670 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 ALDH1A3P47895 512 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 SEMA5AQ13591 1074 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 TAF12Q16514 161 aa8.3□□□□□ -1.08
PDZRN3-212ENST00000498048 KYNUQ16719 465 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms