RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 SETSIPP0DME0 302 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 C21orf59P57076 290 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 SHBQ15464 509 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 HNRNPA1L2Q32P51 320 aaKnown RBP22.59■■□□□ 1.21
CLIC4-204ENST00000497755 NADSYN1Q6IA69 706 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 PMF1Q6P1K2 205 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 NCEH1Q6PIU2 408 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 LCLAT1Q6UWP7 414 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 MFN1Q8IWA4 741 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 TFAP2BQ92481 460 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 AZIN2Q96A70 460 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 MRGPRX3Q96LB0 322 aa22.59■■□□□ 1.21
CLIC4-204ENST00000497755 ELF4Q99607 663 aaPredicted RBP22.59■■□□□ 1.21
CLIC4-204ENST00000497755 ARID1BQ8NFD5 2236 aaPredicted RBP22.59■■□□□ 1.21
CLIC4-204ENST00000497755 SHROOM3Q8TF72 1996 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 E9PAM4 449 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 PIK3R2O00459 728 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 CSKP41240 450 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 RGS7P49802 495 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 ST8SIA6P61647 398 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 KCNJ12Q14500 433 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 INAVAQ3KP66 663 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 C9orf64Q5T6V5 341 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 TCERG1LQ5VWI1 586 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 NUGGCQ68CJ6 796 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 HSCBQ8IWL3 235 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 DHX40Q8IX18 779 aaKnown RBP22.58■■□□□ 1.21
CLIC4-204ENST00000497755 IRGQQ8WZA9 623 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 PCDHGA1Q9Y5H4 931 aa22.58■■□□□ 1.21
CLIC4-204ENST00000497755 A0A1W2PP55 124 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 CBX4O00257 560 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 PLK4O00444 970 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 WNT9AO14904 365 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 MID1O15344 667 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 TBX4P57082 545 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 YWHAEP62258 255 aaKnown RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 RPS24P62847 133 aaKnown RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 LRMPQ12912 555 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 ARID5BQ14865 1188 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 CST6Q15828 149 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 DCAF17Q5H9S7 520 aaPredicted RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 FSCBQ5H9T9 825 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 ZNF557Q8N988 423 aaPredicted RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 SAP25Q8TEE9 199 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 CLEC4CQ8WTT0 213 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 PRICKLE1Q96MT3 831 aaPredicted RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 ZSWIM1Q9BR11 485 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 GOLPH3LQ9H4A5 285 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 ADAMTS1Q9UHI8 967 aa22.57■■□□□ 1.2
CLIC4-204ENST00000497755 COL5A1P20908 1838 aaPredicted RBP22.57■■□□□ 1.2
CLIC4-204ENST00000497755 ENC1O14682 589 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 RNASEH1O60930 286 aaKnown RBP22.56■■□□□ 1.2
CLIC4-204ENST00000497755 ZNF202O95125 648 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 ASLP04424 464 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 CLDN6P56747 220 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 MMS22LQ6ZRQ5 1243 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 MMAAQ8IVH4 418 aaKnown RBP22.56■■□□□ 1.2
CLIC4-204ENST00000497755 KDM1BQ8NB78 822 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 HJURPQ8NCD3 748 aaPredicted RBP22.56■■□□□ 1.2
CLIC4-204ENST00000497755 OR2T34Q8NGX1 318 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 FAM129BQ96TA1 746 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 ZDHHC9Q9Y397 364 aa22.56■■□□□ 1.2
CLIC4-204ENST00000497755 A0A1W2PR77 199 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 TARSL2A2RTX5 802 aaKnown RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 LRRC72A6NJI9 287 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 TTC34A8MYJ7 566 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 RNF225M0QZC1 329 aaPredicted RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 RNASEH2AO75792 299 aaKnown RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 LDOC1O95751 146 aaPredicted RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 LTFP02788 710 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 FYNP06241 537 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 JUPP14923 745 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 SLC8A1P32418 973 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 PRCPP42785 496 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 CTSOP43234 321 aaPredicted RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 KRT85P78386 507 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 SFSWAPQ12872 951 aaKnown RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 DNAJC3Q13217 504 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 CNGA2Q16280 664 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 CARNMT1Q8N4J0 409 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 SKA1Q96BD8 255 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 CNDP2Q96KP4 475 aaKnown RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 FCRL2Q96LA5 508 aaPredicted RBP22.55■■□□□ 1.2
CLIC4-204ENST00000497755 DCBLD2Q96PD2 775 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 OMDQ99983 421 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 SLCO3A1Q9UIG8 710 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 FZD4Q9ULV1 537 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 ERVW-1Q9UQF0 538 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 PTPRQQ9UMZ3 2332 aa22.55■■□□□ 1.2
CLIC4-204ENST00000497755 SETXQ7Z333 2677 aaKnown RBP22.54■■□□□ 1.2
CLIC4-204ENST00000497755 A0A1W2PQ27 194 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 A0A1W2PQ64 194 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 EIF4E1BA6NMX2 242 aaKnown RBP22.54■■□□□ 1.2
CLIC4-204ENST00000497755 ITGAVP06756 1048 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 PAEPP09466 180 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 ABCB4P21439 1286 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 TBXAS1P24557 533 aaPredicted RBP22.54■■□□□ 1.2
CLIC4-204ENST00000497755 CD38P28907 300 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 CCR5P51681 352 aa22.54■■□□□ 1.2
CLIC4-204ENST00000497755 PITRM1Q5JRX3 1037 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms