RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 DCLK1O15075 740 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CD3EAPO15446 510 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 P4HA2O15460 535 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PEX10O60683 326 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 GUCY1B2O75343 617 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TULP3O75386 442 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TOX4O94842 621 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 BAG2O95816 211 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 HMGCRP04035 888 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CYP21A2P08686 494 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATXN1LP0C7T5 689 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TPH1P17752 444 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATP5JP18859 108 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 KCNA5P22460 613 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 GLDCP23378 1020 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CALRP27797 417 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PPIFP30405 207 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 MAPK4P31152 587 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATICP31939 592 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 HTR7P34969 479 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 BSGP35613 385 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CD96P40200 585 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 GPD2P43304 727 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 KCNC1P48547 511 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 DGKEP52429 567 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TERF1P54274 439 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 LOXL3P58215 753 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ARF3P61204 181 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ARF1P84077 181 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZXDAP98168 799 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TBL3Q12788 808 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CDC16Q13042 620 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 SLC12A1Q13621 1099 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CAMK1Q14012 370 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 KRT32Q14532 448 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PSMD6Q15008 389 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 RAB3GAP1Q15042 981 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PLEKHS1Q5SXH7 462 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 AGBL4Q5VU57 503 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 LIPMQ5VYY2 423 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 RRAGBQ5VZM2 374 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 SLC30A6Q6NXT4 461 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 DENND1BQ6P3S1 775 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CD300LDQ6UXZ3 194 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAM43BQ6ZT52 329 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 LARP4Q71RC2 724 aaKnown RBP eCLIP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PXKQ7Z7A4 578 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ADGRE4PQ86SQ3 457 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ULK2Q8IYT8 1036 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CMTM4Q8IZR5 234 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 OR4N4Q8N0Y3 316 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAM109AQ8N4B1 249 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 DCLK2Q8N568 766 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 AOPEPQ8N6M6 819 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 PTGR2Q8N8N7 351 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TMIEQ8NEW7 156 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CEP70Q8NHQ1 597 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 POC1BQ8TC44 478 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 SMCR8Q8TEV9 937 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 UCMAQ8WVF2 138 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 RABGGTAQ92696 567 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 OPTNQ96CV9 577 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 HIC2Q96JB3 615 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 FEM1CQ96JP0 617 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 YTHDC1Q96MU7 727 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 KLHL32Q96NJ5 620 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 GPR20Q99678 358 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CENPOQ9BU64 300 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 MRI1Q9BV20 369 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 MS4A7Q9GZW8 240 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 RNF32Q9H0A6 362 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 OR10A2Q9H208 303 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 NELFAQ9H3P2 528 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 LDAHQ9H6V9 325 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 SYNCQ9H7C4 482 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 BRF2Q9HAW0 419 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 MYOZ2Q9NPC6 264 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 SLC22A11Q9NSA0 550 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 MBNL3Q9NUK0 354 aaKnown RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 IRAK4Q9NWZ3 460 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CWC25Q9NXE8 425 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ZDHHC7Q9NXF8 308 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 TAS2R10Q9NYW0 307 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 HCN3Q9P1Z3 774 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 CD207Q9UJ71 328 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ADAMTS6Q9UKP5 1117 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATP11BQ9Y2G3 1177 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 ATP6V0A2Q9Y487 856 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 USP15Q9Y4E8 981 aaPredicted RBP2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 RAI2Q9Y5P3 530 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 LYVE1Q9Y5Y7 322 aa2.69□□□□□ -1.98
CKS1BP2-201ENST00000497342 DOPEY2Q9Y3R5 2298 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 EPOPA6NHQ4 379 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 MBD3L5A6NJ08 208 aaPredicted RBP2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAM90A7PA6NKC0 464 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 EIF4E1BA6NMX2 242 aaKnown RBP2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 SLC38A8A6NNN8 435 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAM90A22PA8MWA6 464 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 FAM90A12PA8MX19 464 aa2.68□□□□□ -1.98
CKS1BP2-201ENST00000497342 NUDT19A8MXV4 375 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms