RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PNOCQ13519 176 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 FAM133BQ5BKY9 247 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 KIAA0895LQ68EN5 471 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 PNPLA1Q8N8W4 532 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 STK32AQ8WU08 396 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 LMLNQ96KR4 655 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 PPP1R9BQ96SB3 815 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 ACE2Q9BYF1 805 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 PABPC3Q9H361 631 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 ADAMTS1Q9UHI8 967 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 FZD4Q9ULV1 537 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 GPSM3Q9Y4H4 160 aa17.48■□□□□ 0.39
TRAPPC3-207ENST00000497251 WDFY3Q8IZQ1 3526 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 LRRC72A6NJI9 287 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 MSI1O43347 362 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 CTSKP43235 329 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 OXCT1P55809 520 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 SLC12A1Q13621 1099 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 ADAT2Q7Z6V5 191 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 PPM1KQ8N3J5 372 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 TFAP2BQ92481 460 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 SCUBE2Q9NQ36 999 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 TOR4AQ9NXH8 423 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 FBXL12Q9NXK8 326 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 RALYQ9UKM9 306 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 PCDHGA1Q9Y5H4 931 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 SNX11Q9Y5W9 270 aa17.47■□□□□ 0.39
TRAPPC3-207ENST00000497251 A0A1W2PPC4 97 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 M0QYV0 167 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 FSBPO95073 299 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 GNA14O95837 355 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 C1SP09871 688 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 CD70P32970 193 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 NUDT1P36639 197 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 CCR5P51681 352 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 C21orf59P57076 290 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 LRMPQ12912 555 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 CDH18Q13634 790 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 RFWD3Q6PCD5 774 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 CACUL1Q86Y37 369 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 OR2T34Q8NGX1 318 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 SLC39A13Q96H72 371 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 FAM81BQ96LP2 452 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
TRAPPC3-207ENST00000497251 PLXNB3Q9ULL4 1909 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 BICDL2A1A5D9 508 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 ATXN1LP0C7T5 689 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC6A4P31645 630 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 NNMTP40261 264 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 CSKP41240 450 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 RGS7P49802 495 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 SULT2A1Q06520 285 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 ACAP1Q15027 740 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 SMAD1Q15797 465 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 MS4A13Q5J8X5 152 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 PDCD7Q8N8D1 485 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 GANCQ8TET4 914 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 MYO19Q96H55 970 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 MED15Q96RN5 788 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 ORAI3Q9BRQ5 295 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 CNTN6Q9UQ52 1028 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 ITIH6Q6UXX5 1313 aa17.45■□□□□ 0.38
TRAPPC3-207ENST00000497251 MED7O43513 233 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 GABBR2O75899 941 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 ADH1BP00325 375 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 APOEP02649 317 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 IGHV4-34P06331 123 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC2A3P11169 496 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 C5AR1P21730 350 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 VASPP50552 380 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 GALCP54803 685 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 ECT2LQ008S8 904 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 CST6Q15828 149 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 SLC45A4Q5BKX6 768 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 TTC39BQ5VTQ0 682 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 RNF219Q5W0B1 726 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 TMPRSS12Q86WS5 348 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 ZNF366Q8N895 744 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 LMO3Q8TAP4 145 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 WFDC5Q8TCV5 224 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 DQX1Q8TE96 717 aaKnown RBP17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 BTN2A3PQ96KV6 586 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 OMDQ99983 421 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 KDM4CQ9H3R0 1056 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 STIM2Q9P246 746 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 PTPRBP23467 1997 aa17.44■□□□□ 0.38
TRAPPC3-207ENST00000497251 LAMA5O15230 3695 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 A0A1B0GTQ1 180 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 C10orf142B7Z368 130 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 H0Y8X5 98 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 CAPN9O14815 690 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 MAGEC1O60732 1142 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 SIN3BO75182 1162 aa17.43■□□□□ 0.38
TRAPPC3-207ENST00000497251 LUC7L3O95232 432 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms