RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LRPAP1P30533 357 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 HOXA11P31270 313 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ACSL1P33121 698 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LTBRP36941 435 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RAB14P61106 215 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 DCAF7P61962 342 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 EEF1A1P68104 462 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 EEF1A2Q05639 463 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PLD1Q13393 1074 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF267Q14586 743 aaPredicted RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PTPAQ15257 358 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PCBP2Q15366 365 aaKnown RBP eCLIP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 P3H1Q32P28 736 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TDRD12Q587J7 1177 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 EEF1A1P5Q5VTE0 462 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KIF6Q6ZMV9 814 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 DPP9Q86TI2 863 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 UNC45BQ8IWX7 931 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CARFQ8N187 725 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ARL14Q8N4G2 192 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C10orf53Q8N6V4 93 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ATAD1Q8NBU5 361 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LPCAT1Q8NF37 534 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 CEP76Q8TAP6 659 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PHOSPHO2Q8TCD6 241 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP8B4Q8TF62 1192 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 ASB12Q8WXK4 309 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 USP7Q93009 1102 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KIAA1191Q96A73 305 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC22A18Q96BI1 424 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 RMDN1Q96DB5 314 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 C19orf60Q96EN9 201 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 FUBP3Q96I24 572 aaKnown RBP eCLIP3.22□□□□□ -1.891e-7■■■□□ 16.7
SNRNP48-202ENST00000496946 C20orf173Q96LM9 149 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TMEM68Q96MH6 324 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PPP1R16BQ96T49 567 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SPATA25Q9BR10 227 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 SPATA9Q9BWV2 254 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TTLL2Q9BWV7 592 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 UNKQ9C0B0 810 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PLSCR4Q9NRQ2 329 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 LARSQ9P2J5 1176 aaKnown RBP3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 PSME2Q9UL46 239 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 HEY1Q9Y5J3 304 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 TRPV2Q9Y5S1 764 aa3.22□□□□□ -1.89
SNRNP48-202ENST00000496946 KIF24Q5T7B8 1368 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A1W2PPH5 198 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FFAR3O14843 346 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT86O43790 486 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 STX10O60499 249 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CCNDBP1O95273 360 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 GAS8O95995 478 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FYNP06241 537 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SYN1P17600 705 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 POLR2CP19387 275 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 LIFRP42702 1097 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CPA2P48052 419 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TMED10P49755 219 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ALDH3A2P51648 485 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ADCY7P51828 1080 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TNFAIP2Q03169 654 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 VEPH1Q14D04 833 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SNX17Q15036 470 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SF3B4Q15427 424 aaKnown RBP eCLIP3.21□□□□□ -1.92e-6■■■■■ 27
SNRNP48-202ENST00000496946 DPYSL2Q16555 572 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 AANATQ16613 207 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PFKFB3Q16875 520 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 AAK1Q2M2I8 961 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 USP39Q53GS9 565 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FSCBQ5H9T9 825 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM47CQ5HY64 1035 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 STXBP5Q5T5C0 1151 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 C6orf183Q5T699 404 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 IFIT1BQ5T764 474 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 IQSEC1Q6DN90 963 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PAPD4Q6PIY7 484 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 LRIG3Q6UXM1 1119 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TMC5Q6UXY8 1006 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 KDM7AQ6ZMT4 941 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MEX3BQ6ZN04 569 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RFPL4BQ6ZWI9 263 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ADCK1Q86TW2 530 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF677Q86XU0 584 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PPM1KQ8N3J5 372 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF321PQ8N8H1 164 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM71DQ8N9W8 422 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM156AQ8NDB6 213 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC30A5Q8TAD4 765 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SPPL3Q8TCT6 385 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SEPT8Q92599 483 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 IFT74Q96LB3 600 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RPRD1AQ96P16 312 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CDRT15Q96T59 188 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 DHRS9Q9BPW9 319 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 NTMT1Q9BV86 223 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 STK33Q9BYT3 514 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TXLNGYQ9BZA5 131 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RHBGQ9H310 441 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 GHITMQ9H3K2 345 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms