RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 NHSQ6T4R5 1651 aa3.99□□□□□ -1.77
EXOSC3-208ENST00000496910 CTTNBP2Q8WZ74 1663 aa3.99□□□□□ -1.77
EXOSC3-208ENST00000496910 UBR5O95071 2799 aaPredicted RBP3.99□□□□□ -1.77
EXOSC3-208ENST00000496910 CELSR3Q9NYQ7 3312 aa3.99□□□□□ -1.77
EXOSC3-208ENST00000496910 RP1L1Q8IWN7 2480 aaPredicted RBP3.99□□□□□ -1.77
EXOSC3-208ENST00000496910 USP54Q70EL1 1684 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 CDHR4A6H8M9 788 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 E9PLN8 166 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 H0Y626 953 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 H3BNC9 293 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 FCHO1O14526 889 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 CPLX1O14810 134 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 KIAA0355O15063 1070 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 MUSKO15146 869 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ZNF185O15231 689 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 CYP27B1O15528 508 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 THAP12O43422 761 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ACTL6BO94805 426 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 HAUS5O94927 633 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 POMCP01189 267 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 RPLP2P05387 115 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ITGA2BP08514 1039 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 NR2F1P10589 423 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ACADMP11310 421 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TGM1P22735 817 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 HIBADHP31937 336 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ABCD1P33897 745 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PHKA1P46020 1223 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 CLCN2P51788 898 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PPP5CP53041 499 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 NLRP5P59047 1200 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ACTR2P61160 394 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 FAM189BP81408 668 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 MC1RQ01726 317 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 NHLH2Q02577 135 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TCF15Q12870 199 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PRKD1Q15139 912 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TTC31Q49AM3 519 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 KHDC1LQ5JSQ8 128 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 GALNT17Q6IS24 598 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 EFCAB12Q6NXP0 572 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 GADL1Q6ZQY3 521 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 UNC13DQ70J99 1090 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 H1FNTQ75WM6 255 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 SZRD1Q7Z422 152 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PXKQ7Z7A4 578 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 SDCCAG8Q86SQ7 713 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 MICU3Q86XE3 530 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 RHOT2Q8IXI1 618 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 OR8H3Q8N146 312 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 KCTD6Q8NC69 237 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TMIEQ8NEW7 156 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 Q8NFD4 153 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TOR1AIP2Q8NFQ8 470 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ZFP28Q8NHY6 868 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 EXTL1Q92935 676 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 JAKMIP2Q96AA8 810 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 RNF125Q96EQ8 232 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 KLHL32Q96NJ5 620 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 VKORC1Q9BQB6 163 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PI4K2AQ9BTU6 479 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 EIF2AQ9BY44 585 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 DPH1Q9BZG8 443 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TWSG1Q9GZX9 223 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 EPC1Q9H2F5 836 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ZNF768Q9H5H4 540 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 EPS8L2Q9H6S3 715 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PRDM8Q9NQV8 689 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PIH1D1Q9NWS0 290 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TRMT1Q9NXH9 659 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 XPO7Q9UIA9 1087 aaKnown RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TBX20Q9UMR3 447 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 CLCA2Q9UQC9 943 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 TCAF1Q9Y4C2 921 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 HS3ST4Q9Y661 456 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 ZFP37Q9Y6Q3 630 aaPredicted RBP3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 PIAS3Q9Y6X2 628 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 LTN1O94822 1766 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 MYO5BQ9ULV0 1848 aa3.98□□□□□ -1.77
EXOSC3-208ENST00000496910 SMG6Q86US8 1419 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 SETD2Q9BYW2 2564 aaPredicted RBP3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 EIF2AK4Q9P2K8 1649 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 H0Y3Z8 333 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 KIAA0391O15091 583 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 TRIM24O15164 1050 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 BEST1O76090 585 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 AHSGP02765 367 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 TUBB4AP04350 444 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 ITGB1P05556 798 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 PRKCBP05771 671 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 ELANEP08246 267 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 CSH1P0DML2 217 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 CSH2P0DML3 217 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 HADHAP40939 763 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 RGS2P41220 211 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 DPP6P42658 865 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 CARSP49589 748 aaKnown RBP3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 UBASH3AP57075 661 aa3.97□□□□□ -1.77
EXOSC3-208ENST00000496910 NOMO3P69849 1222 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms