RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZFATQ9P243 1243 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 KANSL3Q9P2N6 904 aa11.37□□□□□ -0.59
CMSS1-208ENST00000496116 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
CMSS1-208ENST00000496116 SCN10AQ9Y5Y9 1956 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 ERI2A8K979 691 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 A8MUI8 341 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 FAM72CH0Y354 149 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 KCNK1O00180 336 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CCDC22O60826 627 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 GLRA3O75311 464 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CHRNA1P02708 482 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 BPGMP07738 259 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 MYL2P10916 166 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 IGFBP6P24592 240 aaPredicted RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PTPN3P26045 913 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 SERPINB3P29508 390 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 GARSP41250 739 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 INHBEP58166 350 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CRADDP78560 199 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 BST1Q10588 318 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 UPP1Q16831 310 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 FAM72AQ5TYM5 149 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 ITPRIPL1Q6GPH6 555 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 GDF6Q6KF10 455 aaPredicted RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 FAM72DQ6L9T8 149 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CXCL17Q6UXB2 119 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 GPRIN1Q7Z2K8 1008 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 FAM72BQ86X60 149 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CRLF3Q8IUI8 442 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 C3orf58Q8NDZ4 430 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 UTP4Q969X6 686 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 SKA1Q96BD8 255 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 HDAC11Q96DB2 347 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 VAT1Q99536 393 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 ACBD6Q9BR61 282 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 TBC1D10AQ9BXI6 508 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 LRRC40Q9H9A6 602 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CSNK1G1Q9HCP0 422 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 SYBUQ9NX95 663 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 BFARQ9NZS9 450 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 DCDC2Q9UHG0 476 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 HHLA1C9JL84 531 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 AP2A1O95782 977 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CALB2P22676 271 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PAX3P23760 479 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PDE1BQ01064 536 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CDK18Q07002 472 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 TIGD5Q53EQ6 642 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 AGMOQ6ZNB7 445 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 MRPL10Q7Z7H8 261 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 RPAINQ86UA6 219 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 SERINC5Q86VE9 423 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 LONP2Q86WA8 852 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 RASSF3Q86WH2 238 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PPP1R14CQ8TAE6 165 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 MYLPFQ96A32 169 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 CERS2Q96G23 380 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 NSL1Q96IY1 281 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 TKTL2Q9H0I9 626 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 XPNPEP3Q9NQH7 507 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PIH1D1Q9NWS0 290 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 NOP53Q9NZM5 478 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 TRHDEQ9UKU6 1024 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 DSEQ9UL01 958 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 RPL26L1Q9UNX3 145 aaKnown RBP11.36□□□□□ -0.59
CMSS1-208ENST00000496116 RPS6KL1Q9Y6S9 549 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 PCNTO95613 3336 aa11.36□□□□□ -0.59
CMSS1-208ENST00000496116 FAM237BA0A1B0GVD1 139 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TPP1O14773 563 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 B3GAT3O94766 335 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ATP5BP06576 529 aaKnown RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ITGA2BP08514 1039 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 GP5P40197 560 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 CXCR3P49682 368 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 RABGGTBP53611 331 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 CACNA2D1P54289 1103 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 OCRLQ01968 901 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 KRT72Q14CN4 511 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 TEX44Q53QW1 395 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 GRTP1Q5TC63 336 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 MFSD14CQ5VZR4 134 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 UNC5BQ8IZJ1 945 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 DNAAF3Q8N9W5 541 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 SMC1BQ8NDV3 1235 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 EDEM1Q92611 657 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 CPNE1Q99829 537 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 WWP1Q9H0M0 922 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 EBF2Q9HAK2 575 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 DMAP1Q9NPF5 467 aaPredicted RBP11.35□□□□□ -0.59
CMSS1-208ENST00000496116 ANLNQ9NQW6 1124 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 THAP1Q9NVV9 213 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 OR12D3Q9UGF7 316 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 CCDC195A0A1B0GUA6 201 aa11.35□□□□□ -0.59
CMSS1-208ENST00000496116 AP3B1O00203 1094 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms