RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 RRN3Q9NYV6 651 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 KLHL8Q9P2G9 620 aaPredicted RBP15.75■□□□□ 0.11
CALD1-222ENST00000495522 FBXW11Q9UKB1 542 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 ST3GAL5Q9UNP4 418 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 PCNTO95613 3336 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 MYBPHLA2RUH7 354 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 FCHO1O14526 889 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 NCAM2O15394 837 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 SNNO75324 88 aaPredicted RBP15.75■□□□□ 0.11
CALD1-222ENST00000495522 LTFP02788 710 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 POLBP06746 335 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 USP17L7P0C7H9 530 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 NCAM1P13591 858 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 CALB2P22676 271 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 CLCNKBP51801 687 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 ARL13BQ3SXY8 428 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 CES4AQ5XG92 561 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 CRLF3Q8IUI8 442 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 TP53INP2Q8IXH6 220 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 KCNK16Q96T55 309 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 BTBD10Q9BSF8 475 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 DDIT4Q9NX09 232 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 SLC17A6Q9P2U8 582 aa15.75■□□□□ 0.11
CALD1-222ENST00000495522 TIMM13Q9Y5L4 95 aaPredicted RBP15.75■□□□□ 0.11
CALD1-222ENST00000495522 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.75■□□□□ 0.11
CALD1-222ENST00000495522 C2orf71A6NGG8 1288 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 KCNK1O00180 336 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 GLRA3O75311 464 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 ALDOAP04075 364 aaKnown RBP15.74■□□□□ 0.11
CALD1-222ENST00000495522 PTPN3P26045 913 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 SPANXN3Q5MJ09 141 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 RSPH3Q86UC2 560 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 RASSF3Q86WH2 238 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 ARID3BQ8IVW6 561 aaPredicted RBP15.74■□□□□ 0.11
CALD1-222ENST00000495522 GIMAP7Q8NHV1 300 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 ATP2A3Q93084 1043 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 SMARCD1Q96GM5 515 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 PRR11Q96HE9 360 aaPredicted RBP15.74■□□□□ 0.11
CALD1-222ENST00000495522 MIPEPQ99797 713 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 BRD8Q9H0E9 1235 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 ANLNQ9NQW6 1124 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 CHST12Q9NRB3 414 aa15.74■□□□□ 0.11
CALD1-222ENST00000495522 TPP1O14773 563 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 KPNA6O60684 536 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 F9P00740 461 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 ITGA2BP08514 1039 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 AKR1A1P14550 325 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 AFF1P51825 1210 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 PPIDQ08752 370 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 STX3Q13277 289 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 INTS6LQ5JSJ4 861 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 LPPQ93052 612 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 WWP1Q9H0M0 922 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 RNPEPL1Q9HAU8 725 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 ZFATQ9P243 1243 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 TXNDC16Q9P2K2 825 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 ARL5CA6NH57 179 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 I6L893 689 aaPredicted RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 MTSS1O43312 755 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 PEX11AO75192 247 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 AP2A1O95782 977 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 TOP3BO95985 862 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 IGHA2P01877 340 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 C6orf222P0C671 652 aaPredicted RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 PCSK1P29120 753 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 RPL9P32969 192 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 ZNF135P52742 658 aaPredicted RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 CACNA2D1P54289 1103 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 PDE1CQ14123 709 aaPredicted RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 FASTKD1Q53R41 847 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 TLDC1Q6P9B6 456 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 TTC7BQ86TV6 843 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 ALYREFQ86V81 257 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 SH3TC2Q8TF17 1288 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 NSMCE1Q8WV22 266 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 MTG1Q9BT17 334 aaPredicted RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 CADM1Q9BY67 442 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 NMUR2Q9GZQ4 415 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 LRRC40Q9H9A6 602 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 TMEM30AQ9NV96 361 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 THAP1Q9NVV9 213 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 MIOSQ9NXC5 875 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 DCDC2Q9UHG0 476 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
CALD1-222ENST00000495522 PSAT1Q9Y617 370 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 RPS6KL1Q9Y6S9 549 aa15.73■□□□□ 0.11
CALD1-222ENST00000495522 MYADML2A6NDP7 307 aa15.72■□□□□ 0.11
CALD1-222ENST00000495522 HHLA1C9JL84 531 aa15.72■□□□□ 0.11
CALD1-222ENST00000495522 GYG2O15488 501 aa15.72■□□□□ 0.11
CALD1-222ENST00000495522 DUSP11O75319 330 aaKnown RBP15.72■□□□□ 0.11
CALD1-222ENST00000495522 ESRRAP11474 423 aaPredicted RBP15.72■□□□□ 0.11
CALD1-222ENST00000495522 MX2P20592 715 aa15.72■□□□□ 0.11
CALD1-222ENST00000495522 GARSP41250 739 aaKnown RBP15.72■□□□□ 0.11
CALD1-222ENST00000495522 PDE1BQ01064 536 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms