RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 EXOC4Q96A65 974 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 ATP6V1G3Q96LB4 118 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.723e-6■■■■□ 20.8
HDAC3-214ENST00000495485 TMEM109Q9BVC6 243 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 TKTL2Q9H0I9 626 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 SMOC2Q9H3U7 446 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CLDND1Q9NY35 253 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
HDAC3-214ENST00000495485 MYO16Q9Y6X6 1858 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 MTMR11A4FU01 709 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 E7EVH7 732 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 IRAK2O43187 625 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RIPK2O43353 540 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 TGM5O43548 720 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 XYLBO75191 536 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 GCATO75600 419 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 SLC34A2O95436 690 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 APOEP02649 317 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 FYNP06241 537 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 OR4Q2P0C623 313 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 CSH1P0DML2 217 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 CSH2P0DML3 217 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 PECAM1P16284 738 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 GOT1P17174 413 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 AMPD1P23109 780 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 OR1D2P34982 312 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RPL22P35268 128 aaKnown RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 MTHFRP42898 656 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 PPP3CCP48454 512 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 CDK16Q00536 496 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ZNF33AQ06730 810 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 SMAD4Q13485 552 aaKnown RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 SLC29A2Q14542 456 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 STAT4Q14765 748 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 VEPH1Q14D04 833 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 TAF12Q16514 161 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 HIF1AQ16665 826 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 GLIPR1L2Q4G1C9 344 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RAB6CQ53S08 254 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ANKRD54Q6NXT1 300 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 MSANTD2Q6P1R3 559 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 LRRC31Q6UY01 552 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ARHGEF18Q6ZSZ5 1173 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 TAOK1Q7L7X3 1001 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ADGRD2Q7Z7M1 963 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 LRRC49Q8IUZ0 686 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 UNC45BQ8IWX7 931 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 STKLD1Q8NE28 680 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 DQX1Q8TE96 717 aaKnown RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 PPP1R2P1Q96PQ5 205 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 VAT1Q99536 393 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 SEPT5Q99719 369 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 RAB6CQ9H0N0 254 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 CENPHQ9H3R5 247 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 TMBIM4Q9HC24 238 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 WDR6Q9NNW5 1121 aaKnown RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ARHGEF38Q9NXL2 777 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 PSD3Q9NYI0 1048 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 SAE1Q9UBE0 346 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-214ENST00000495485 OR12D3Q9UGF7 316 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ADAM21Q9UKJ8 722 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 TLR6Q9Y2C9 796 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 ASB3Q9Y575 518 aa10.57□□□□□ -0.72
HDAC3-214ENST00000495485 FAM92AA1XBS5 289 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 C5orf60A6NFR6 353 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 H3BQF6 201 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 AP3B1O00203 1094 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RASGRF2O14827 1237 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RGS16O15492 202 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 PSMD3O43242 534 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SPAG6O75602 509 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 FGF19O95750 216 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ABHD2P08910 425 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RBL1P28749 1068 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 MAGEA4P43358 317 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ALDH1A3P47895 512 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 LMAN1P49257 510 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ATXN1P54253 815 aaKnown RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 UAP1Q16222 522 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 DDR2Q16832 855 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 DNAJC21Q5F1R6 531 aaKnown RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 NCBP2-AS2Q69YL0 99 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 NPNTQ6UXI9 565 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 BHLHA9Q7RTU4 235 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RBM23Q86U06 439 aaKnown RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 TAC4Q86UU9 113 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ELMOD1Q8N336 334 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 RIBC1Q8N443 379 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-214ENST00000495485 ZNF276Q8N554 614 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 SMRP1Q8NCR6 262 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 KREMEN2Q8NCW0 462 aa10.56□□□□□ -0.72
HDAC3-214ENST00000495485 CCNYQ8ND76 341 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms