RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	HACE1	Q8IYU2	909 aa		13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ARHGAP18	Q8N392	663 aa		13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	NDRG1	Q92597	394 aa	Known RBP	13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	CERS2	Q96G23	380 aa		13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SNX25	Q9H3E2	840 aa		13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	DDX43	Q9NXZ2	648 aa	Known RBP	13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SNTG2	Q9NY99	539 aa		13.77	□□□□□ -0.2
SUPT20H-222	ENST00000495071	BST2	Q10589	180 aa	Known RBP	13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	OLIG2	Q13516	323 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SH3D19	Q5HYK7	790 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NXN	Q6DKJ4	435 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DCLK2	Q8N568	766 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ICA1L	Q8NDH6	482 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TSNARE1	Q96NA8	513 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	COG4	Q9H9E3	785 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	POMP	Q9Y244	141 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	HES2	Q9Y543	173 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	HACD1	B0YJ81	288 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CFLAR	O15519	480 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ZBTB7A	O95365	584 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SPR	P35270	261 aa	Predicted RBP	13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	BCAT1	P54687	386 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	AQP4	P55087	323 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NIPAL4	Q0D2K0	466 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TUBB3	Q13509	450 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PDK1	Q15118	436 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SFT2D3	Q587I9	215 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	STXBP5	Q5T5C0	1151 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SMYD5	Q6GMV2	418 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FRMD7	Q6ZUT3	714 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SLC26A9	Q7LBE3	791 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DEFB106A	Q8N104	65 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	BEST2	Q8NFU1	509 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	OR52K1	Q8NGK4	314 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	AZIN2	Q96A70	460 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	KCNK16	Q96T55	309 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PRDM12	Q9H4Q4	367 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DNAJC28	Q9NX36	388 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	BFAR	Q9NZS9	450 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TUBGCP4	Q9UGJ1	667 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DOCK1	Q14185	1865 aa		13.77	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCDC78	A2IDD5	438 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MYL4	P12829	197 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NUDT2	P50583	147 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DEUP1	Q05D60	604 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MAVS	Q7Z434	540 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SORT1	Q99523	831 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ELP3	Q9H9T3	547 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ACSS2	Q9NR19	701 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TMPRSS4	Q9NRS4	437 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MTMR10	Q9NXD2	777 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ADAMTS6	Q9UKP5	1117 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SI	P14410	1827 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	EVPL	Q92817	2033 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	KPNA7	A9QM74	516 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCNT2	O60583	730 aa	Known RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TSPAN1	O60635	241 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	USP2	O75604	605 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	GSR	P00390	522 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	LGALS2	P05162	132 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	COX4I1	P13073	169 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCNI	Q14094	377 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	STEAP4	Q687X5	459 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ACAD11	Q709F0	780 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ZNF781	Q8N8C0	355 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ACTRT2	Q8TDY3	377 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RNF139	Q8WU17	664 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	C18orf25	Q96B23	403 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	IFT43	Q96FT9	208 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	OLFM3	Q96PB7	478 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CAB39L	Q9H9S4	337 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071		A0A096LPK6	155 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCDC160	A6NGH7	325 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	GABBR2	O75899	941 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ALDH1A2	O94788	518 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SLC25A27	O95847	323 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ITGAX	P20702	1163 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	GNL1	P36915	607 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SERPINB8	P50452	374 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CDK7	P50613	346 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TTLL12	Q14166	644 aa	Predicted RBP	13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FAM187B	Q17R55	369 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	KIZ	Q2M2Z5	673 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	HSP90AA5P	Q58FG0	334 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MAP3K21	Q5TCX8	1036 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ISLR2	Q6UXK2	745 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PDSS2	Q86YH6	399 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SLC2A14	Q8TDB8	520 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SCYL1	Q96KG9	808 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CAMKK2	Q96RR4	588 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CPNE1	Q99829	537 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	APOL2	Q9BQE5	337 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NFKBIZ	Q9BYH8	718 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	VCX3A	Q9NNX9	186 aa		13.76	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RLF	Q13129	1914 aa		13.75	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SOCS7	O14512	581 aa		13.75	□□□□□ -0.21
SUPT20H-222	ENST00000495071	IRF6	O14896	467 aa		13.75	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DGKI	O75912	1065 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms