RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 CFAP97Q9P2B7 532 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 PPARGC1AQ9UBK2 798 aaKnown RBP12.48□□□□□ -0.41
BRD3-206ENST00000494743 VANGL2Q9ULK5 521 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 ANAPC1Q9H1A4 1944 aa12.48□□□□□ -0.41
BRD3-206ENST00000494743 GOLGA6L10A0A0M3HER8 536 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 WASH4PA8MWX3 477 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 CCDC188H7C350 402 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 APOL1O14791 398 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 FGF10O15520 208 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 APOC2P02655 101 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 PECAM1P16284 738 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 ZFXP17010 805 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 ERCC2P18074 760 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 TACR2P21452 398 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 TGM2P21980 687 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 AMPD1P23109 780 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 EPHB2P29323 1055 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 IRAK1P51617 712 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 C2orf54Q08AI8 447 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 PAFAH1B3Q15102 231 aaKnown RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 NOMO1Q15155 1222 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 CCNG2Q16589 344 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 CES5AQ6NT32 575 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 GET4Q7L5D6 327 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 ARID3BQ8IVW6 561 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 NOA1Q8NC60 698 aaKnown RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 SMRP1Q8NCR6 262 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 ZSCAN18Q8TBC5 510 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 FGF13Q92913 245 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 IGSF8Q969P0 613 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 ASB16Q96NS5 453 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 MAK16Q9BXY0 300 aaKnown RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 KLC2Q9H0B6 622 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 ZNF212Q9UDV6 495 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 LSM7Q9UK45 103 aaKnown RBP12.47□□□□□ -0.41
BRD3-206ENST00000494743 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 MFHAS1Q9Y4C4 1052 aa12.47□□□□□ -0.41
BRD3-206ENST00000494743 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 LIASO43766 372 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 MFSD11O43934 449 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 PHF2O75151 1096 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RHOQP17081 205 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 FNTAP49354 379 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 OTUD4Q01804 1114 aaKnown RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 GBE1Q04446 702 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 ATAT1Q5SQI0 421 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RWDD4Q6NW29 188 aaKnown RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 TTC27Q6P3X3 843 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RFWD3Q6PCD5 774 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 DRICH1Q6PGQ1 229 aaPredicted RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 NPNTQ6UXI9 565 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 LRRC31Q6UY01 552 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 CPXM2Q8N436 756 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 NPWQ8N729 165 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RTL3Q8N8U3 475 aaKnown RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 ACTL9Q8TC94 416 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 C1orf54Q8WWF1 131 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 SUSD6Q92537 303 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 NKD2Q969F2 451 aaPredicted RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 HAUS1Q96CS2 278 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 RIPOR3Q96MK2 946 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 OLFM3Q96PB7 478 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 FRMD8P1Q9BZ68 369 aaPredicted RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 KIF9Q9HAQ2 790 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 TRPV4Q9HBA0 871 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 DTLQ9NZJ0 730 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 SAE1Q9UBE0 346 aaPredicted RBP12.46□□□□□ -0.41
BRD3-206ENST00000494743 CDH7Q9ULB5 785 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 SH3BP1Q9Y3L3 701 aa12.46□□□□□ -0.41
BRD3-206ENST00000494743 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 F5H5T6 163 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 SCAMP3O14828 347 aaKnown RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 DAPK3O43293 454 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 CNTN5O94779 1100 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 FCARP24071 287 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 MTHFRP42898 656 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 NR2C2P49116 596 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 SGSHP51688 502 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 SLC10A2Q12908 348 aaPredicted RBP12.45□□□□□ -0.42
BRD3-206ENST00000494743 ALFQ53S48 1182 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 FAM78AQ5JUQ0 283 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 AFMIDQ63HM1 303 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 RNF43Q68DV7 783 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 C1orf228Q6PIY5 440 aa12.45□□□□□ -0.42
BRD3-206ENST00000494743 TMCO3Q6UWJ1 677 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms