RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 CYTH2Q99418 400 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 VN1R3Q9BXE9 311 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 MRPL9Q9BYD2 267 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 CRISPLD2Q9H0B8 497 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 GMIPQ9P107 970 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 RSPH14Q9UHP6 348 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 NUDT5Q9UKK9 219 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 F5H423 210 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 NCAM2O15394 837 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 TYROBPO43914 113 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 SOAT2O75908 522 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 STK10O94804 968 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 MLNP12872 115 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PRKCHP24723 683 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 GARSP41250 739 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 IFNAR2P48551 515 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 SLC18A1P54219 525 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 TLE2Q04725 743 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 ZBTB17Q13105 803 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PARP6Q2NL67 630 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 UNC5AQ6ZN44 842 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PDZD4Q76G19 769 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 RNF168Q8IYW5 571 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 LRRC43Q8N309 656 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PDCD7Q8N8D1 485 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 GPR152Q8TDT2 470 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 MRRFQ96E11 262 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 CFAP36Q96G28 342 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 FCRL2Q96LA5 508 aaPredicted RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 EBNA1BP2Q99848 306 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 PPP1R12CQ9BZL4 782 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 FAM107BQ9H098 131 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 BRD8Q9H0E9 1235 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 FBXO44Q9H4M3 255 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 MLXIPLQ9NP71 852 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 SMYD2Q9NRG4 433 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 SENP1Q9P0U3 644 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 ZC3H7BQ9UGR2 993 aaKnown RBP10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 TBX21Q9UL17 535 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 BPTFQ12830 3046 aa10.92□□□□□ -0.66
PRPF4B-209ENST00000494674 FAM47DPA6NHR8 397 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 CXorf49A8MYA2 514 aaPredicted RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ZNF189O75820 626 aaPredicted RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 CCR1P32246 355 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 STX2P32856 288 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 CD68P34810 354 aaPredicted RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 HTR7P34969 479 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 NRG1Q02297 640 aaPredicted RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ELAVL2Q12926 359 aaKnown RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 STEAP4Q687X5 459 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 LRRC8BQ6P9F7 803 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 KLHDC8BQ8IXV7 354 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 LRRC34Q8IZ02 419 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ZNF683Q8IZ20 524 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ANKRD42Q8N9B4 389 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 MGARPQ8TDB4 240 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 CKAP2Q8WWK9 683 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 RNF34Q969K3 372 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ZNF419Q96HQ0 510 aaPredicted RBP10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 TOX2Q96NM4 488 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 SERPINB11Q96P15 392 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 KCNK9Q9NPC2 374 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 SEPT10Q9P0V9 454 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 ANAPC1Q9H1A4 1944 aa10.91□□□□□ -0.66
PRPF4B-209ENST00000494674 LAMA2P24043 3122 aaKnown RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 EBAG9O00559 213 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 ADAM12O43184 909 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 SPAG7O75391 227 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 PARNO95453 639 aaKnown RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 CPP00450 1065 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 APOEP02649 317 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 GSTA2P09210 222 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 HAPLN1P10915 354 aaPredicted RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 CPB1P15086 417 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 KRT15P19012 456 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 MX2P20592 715 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 SERPINB6P35237 376 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 MSH2P43246 934 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 PIK3R6Q5UE93 754 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 AFMIDQ63HM1 303 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 KCTD11Q693B1 232 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 TRMT10BQ6PF06 316 aaKnown RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 C6orf89Q6UWU4 347 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 SH2D5Q6ZV89 423 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 DEFB128Q7Z7B8 93 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 C14orf80Q86SX3 495 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 C4orf33Q8N1A6 199 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 SPPL2BQ8TCT7 592 aa10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 DIS3LQ8TF46 1054 aaKnown RBP10.9□□□□□ -0.66
PRPF4B-209ENST00000494674 ARNTL2Q8WYA1 636 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms