RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 RNFT2Q96EX2 444 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 VEZTQ9HBM0 779 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 BEX4Q9NWD9 120 aaPredicted RBP6.75□□□□□ -1.33
SMC2-205ENST00000493955 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 SLC25A10Q9UBX3 287 aaPredicted RBP6.75□□□□□ -1.33
SMC2-205ENST00000493955 POLG2Q9UHN1 485 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 CAMK2AQ9UQM7 478 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 NAALADL1Q9UQQ1 740 aa6.75□□□□□ -1.33
SMC2-205ENST00000493955 NPIPB13A6NJU9 1138 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 NPIPB5A8MRT5 1133 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 NPIPB4C9JG80 1138 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 QSOX1O00391 747 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 KAT7O95251 611 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 TTLL1O95922 423 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 SCGB1D1O95968 90 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 SLC3A2P08195 630 aaKnown RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 EBLN1P0CF75 366 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 LYL1P12980 280 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 STAT1P42224 750 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 EEFSECP57772 596 aaKnown RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 ARF3P61204 181 aaPredicted RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 ARF1P84077 181 aaKnown RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 SETQ01105 290 aaPredicted RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 CFHR3Q02985 330 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 ERCC6LQ2NKX8 1250 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 LY6G5CQ5SRR4 150 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 FAM205BPQ63HN1 556 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 ATF7IPQ6VMQ6 1270 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 ADGRG6Q86SQ4 1221 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 DIS3L2Q8IYB7 885 aaKnown RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 LAS2Q8IYD9 372 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 SLC44A3Q8N4M1 653 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 LINC01465Q8N7H1 131 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 ZNF366Q8N895 744 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 ADPRHL1Q8NDY3 354 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 AKAP1Q92667 903 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMC2-205ENST00000493955 SDF4Q9BRK5 362 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 THAP7Q9BT49 309 aaPredicted RBP6.74□□□□□ -1.33
SMC2-205ENST00000493955 SLC25A18Q9H1K4 315 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 SLC22A11Q9NSA0 550 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 NSMCE4AQ9NXX6 385 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 TAS2R10Q9NYW0 307 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 FZD4Q9ULV1 537 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 GPR34Q9UPC5 381 aa6.74□□□□□ -1.33
SMC2-205ENST00000493955 MAST3O60307 1309 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 GOLGA6L10A0A0M3HER8 536 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 GAGE10A6NGK3 116 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 TTC34A8MYJ7 566 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 PDE8BO95263 885 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 RPS6KB1P23443 525 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 NDUFS1P28331 727 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 EPHA8P29322 1005 aaPredicted RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 AGTR2P50052 363 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 MVDP53602 400 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 WDR5P61964 334 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 PTP4A2Q12974 167 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 ALKBH1Q13686 389 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 TBCEQ15813 527 aaPredicted RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 GPR162Q16538 588 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 RNASE12Q5GAN4 147 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 CPLX4Q7Z7G2 160 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 PEG10Q86TG7 708 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 NGEFQ8N5V2 710 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 RUFY2Q8WXA3 655 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 ERP27Q96DN0 273 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 NUDT16L1Q9BRJ7 211 aaKnown RBP6.73□□□□□ -1.33
SMC2-205ENST00000493955 MLST8Q9BVC4 326 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 CTDSP1Q9GZU7 261 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 KLQ9UEF7 1012 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 NISCHQ9Y2I1 1504 aa6.73□□□□□ -1.33
SMC2-205ENST00000493955 CCDC151A5D8V7 595 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 TIPRLO75663 272 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 CLEC3BP05452 202 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 PRPH2P23942 346 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 RPS6KA3P51812 740 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 CDH15P55291 814 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 SLC37A1P57057 533 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 IRX6P78412 446 aaPredicted RBP6.72□□□□□ -1.33
SMC2-205ENST00000493955 B4GALNT1Q00973 533 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 NUCB1Q02818 461 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 NAA25Q14CX7 972 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 CDSNQ15517 529 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 GXYLT1Q4G148 440 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 MRGPREQ86SM8 312 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 LCORLQ8N3X6 602 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 RSRC1Q96IZ7 334 aaKnown RBP6.72□□□□□ -1.33
SMC2-205ENST00000493955 MMS19Q96T76 1030 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 ADGRE3Q9BY15 652 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 USP44Q9H0E7 712 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 TTYH1Q9H313 450 aaPredicted RBP6.72□□□□□ -1.33
SMC2-205ENST00000493955 SEMA4BQ9NPR2 832 aaPredicted RBP6.72□□□□□ -1.33
SMC2-205ENST00000493955 ZDHHC7Q9NXF8 308 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 HCN3Q9P1Z3 774 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 TBC1D14Q9P2M4 693 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 TSC22D4Q9Y3Q8 395 aa6.72□□□□□ -1.33
SMC2-205ENST00000493955 LINC00473A8K010 186 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms