RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 VANGL2Q9ULK5 521 aa16.7■□□□□ 0.26
SATB1-217ENST00000493952 EP300Q09472 2414 aaPredicted RBP16.7■□□□□ 0.26
SATB1-217ENST00000493952 TCRBV5S1A1TA0A578 114 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 C2CD4BA6NLJ0 364 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 ENDOD1O94919 500 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 KRT3P12035 628 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 SKILP12757 684 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 PDGFRAP16234 1089 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 GABRG2P18507 467 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 SDC4P31431 198 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
SATB1-217ENST00000493952 RFC1P35251 1148 aaPredicted RBP16.69■□□□□ 0.26
SATB1-217ENST00000493952 ATP11AP98196 1134 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 KLHL30Q0D2K2 578 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 CDO1Q16878 200 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 C15orf59Q2T9L4 293 aaPredicted RBP16.69■□□□□ 0.26
SATB1-217ENST00000493952 FUT11Q495W5 492 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 CCDC14Q49A88 953 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 MBLAC2Q68D91 279 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 C14orf80Q86SX3 495 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 MCOLN2Q8IZK6 566 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 CYB5D2Q8WUJ1 264 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 CPLX3Q8WVH0 158 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 IGSF8Q969P0 613 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 RPRD1AQ96P16 312 aaPredicted RBP16.69■□□□□ 0.26
SATB1-217ENST00000493952 SELENOOQ9BVL4 669 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 SIK2Q9H0K1 926 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
SATB1-217ENST00000493952 INTS6Q9UL03 887 aaKnown RBP16.69■□□□□ 0.26
SATB1-217ENST00000493952 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 GVINP1Q7Z2Y8 2422 aa16.69■□□□□ 0.26
SATB1-217ENST00000493952 SIGLEC16A6NMB1 481 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 H0Y626 953 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 DCLK1O15075 740 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 NPC1O15118 1278 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 TIMM44O43615 452 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 GYPCP04921 128 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 PRKCHP24723 683 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 PTPN9P43378 593 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 PTPRNQ16849 979 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 RABGAP1LQ5R372 815 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 TTC39BQ5VTQ0 682 aaPredicted RBP16.68■□□□□ 0.26
SATB1-217ENST00000493952 HGSNATQ68CP4 663 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 WDR59Q6PJI9 974 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 KBTBD6Q86V97 674 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 FAM131BQ86XD5 332 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 CCDC117Q8IWD4 279 aaPredicted RBP16.68■□□□□ 0.26
SATB1-217ENST00000493952 CCAR2Q8N163 923 aaKnown RBP16.68■□□□□ 0.26
SATB1-217ENST00000493952 PGBD3Q8N328 593 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 FAM160A2Q8N612 972 aaPredicted RBP16.68■□□□□ 0.26
SATB1-217ENST00000493952 RUBCNQ92622 972 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 NCDNQ9UBB6 729 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 RAB23Q9ULC3 237 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 CAPN11Q9UMQ6 739 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 SNX10Q9Y5X0 201 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
SATB1-217ENST00000493952 ZNF292O60281 2723 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 A0A1B0GVM2 712 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 TCAF2A6NFQ2 919 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 DDX3XO00571 662 aaKnown RBP eCLIP16.67■□□□□ 0.26
SATB1-217ENST00000493952 TPM3P06753 285 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 POLR2EP19388 210 aaKnown RBP16.67■□□□□ 0.26
SATB1-217ENST00000493952 GPD1P21695 349 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 RRM1P23921 792 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 ZBED6P86452 979 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 C5orf22Q49AR2 442 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 PPP1R15BQ5SWA1 713 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 LAIR1Q6GTX8 287 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 DNAJC24Q6P3W2 148 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 SERPINA13PQ6UXR4 307 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
SATB1-217ENST00000493952 ZNF683Q8IZ20 524 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 IQCDQ96DY2 449 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 MCEEQ96PE7 176 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 HINFPQ9BQA5 517 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 SLC6A17Q9H1V8 727 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 TMEM51Q9NW97 253 aa16.67■□□□□ 0.26
SATB1-217ENST00000493952 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 HLA-EP13747 358 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 NDUFV2P19404 249 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 PTPRZ1P23471 2315 aaPredicted RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 CASP14P31944 242 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 CSKP41240 450 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 RPL7AP62424 266 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 STARD3Q14849 445 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 E2F5Q15329 346 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 FNDC3BQ53EP0 1204 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 USP39Q53GS9 565 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 TDRD12Q587J7 1177 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 PITRM1Q5JRX3 1037 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 CXorf57Q6NSI4 855 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 PPP1R2P3Q6NXS1 205 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 STRADAQ7RTN6 431 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms