RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CAPRIN2Q6IMN6 1127 aaKnown RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 TTC27Q6P3X3 843 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 PKN3Q6P5Z2 889 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 TRIM72Q6ZMU5 477 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 PDZD4Q76G19 769 aaPredicted RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 RNF149Q8NC42 400 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ATL2Q8NHH9 583 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ZNF461Q8TAF7 563 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SHC3Q92529 594 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SAAL1Q96ER3 474 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 ACCSQ96QU6 501 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 FIZ1Q96SL8 496 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 SH3GL3Q99963 347 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 CORO1BQ9BR76 489 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 DHX33Q9H6R0 707 aaKnown RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 RNPEPL1Q9HAU8 725 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 EURLQ9NYK6 297 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 LNPEPQ9UIQ6 1025 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 NOCTQ9UK39 431 aaKnown RBP11□□□□□ -0.65
PDLIM1-205ENST00000493949 EXOC7Q9UPT5 735 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 COQ4Q9Y3A0 265 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 CDY1Q9Y6F8 540 aa11□□□□□ -0.65
PDLIM1-205ENST00000493949 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 TMEM189-UBE2V1I3L0A0 370 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 KHNYNO15037 678 aaKnown RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 B4GALT5O43286 388 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 AHCYL1O43865 530 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ATG13O75143 517 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ATP2C2O75185 946 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 LYPLA2O95372 231 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ATP5BP06576 529 aaKnown RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 NUDT7P0C024 238 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CALB2P22676 271 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 VAMP7P51809 220 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 KPNA1P52294 538 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 BPIFB4P59827 614 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CDR2Q01850 454 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 POU5F1BQ06416 359 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 C19orf57Q0VDD7 668 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CCNG2Q16589 344 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 AMHR2Q16671 573 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CBWD6Q4V339 395 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 FAM133BQ5BKY9 247 aaKnown RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CBWD3Q5JTY5 395 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CBWD5Q5RIA9 395 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ANKRD20A2Q5SQ80 823 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 CYP4A22Q5TCH4 519 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ANKRD20A1Q5TYW2 823 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ANKRD20A3Q5VUR7 823 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 PIP4P1Q86T03 277 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 TCEAL8Q8IYN2 117 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ZSCAN18Q8TBC5 510 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC7A3Q8WY07 619 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 VCPIP1Q96JH7 1222 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 MFRPQ9BY79 579 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 FRMD8P1Q9BZ68 369 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 MMADHCQ9H3L0 296 aaPredicted RBP10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC32A1Q9H598 525 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 POLD4Q9HCU8 107 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 FGFR1OP2Q9NVK5 253 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC24A2Q9UI40 661 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 AGAP1Q9UPQ3 857 aa10.99□□□□□ -0.65
PDLIM1-205ENST00000493949 ADAMTS9Q9P2N4 1935 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 PLXND1Q9Y4D7 1925 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 A6NHS1 94 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 PTGESO14684 152 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 CLIC2O15247 247 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 NEBLO76041 1014 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ZWINTO95229 277 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 NPTXRO95502 500 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 IL1BP01584 269 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 FESP07332 822 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 GSTA2P09210 222 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 NEFHP12036 1026 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ATP6V1C1P21283 382 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 MXI1P50539 228 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SCAPQ12770 1279 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 PON2Q15165 354 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 PDK4Q16654 411 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC45A4Q5BKX6 768 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SLC8B1Q6J4K2 584 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ACAD10Q6JQN1 1059 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 GJB7Q6PEY0 223 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ANKS3Q6ZW76 656 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ANKS1BQ7Z6G8 1248 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 RAB44Q7Z6P3 723 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 SYCP3Q8IZU3 236 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ZCCHC9Q8N567 271 aaKnown RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 XXYLT1Q8NBI6 393 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 LEMD2Q8NC56 503 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 TMC2Q8TDI7 906 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 STK32AQ8WU08 396 aa10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 ALKBH8Q96BT7 664 aaKnown RBP10.98□□□□□ -0.65
PDLIM1-205ENST00000493949 RSPRY1Q96DX4 576 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms