RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SLC16A3O15427 465 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ALDOAP04075 364 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 TUBB4AP04350 444 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 SCG2P13521 617 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ALADP13716 330 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ZNF37AP17032 561 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 IGFBP2P18065 325 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 MATN1P21941 496 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 TBXAS1P24557 533 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ADRA1DP25100 572 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 IGHMBP2P38935 993 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 PLIN5Q00G26 463 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CDK18Q07002 472 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 NEXNQ0ZGT2 675 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 LRMPQ12912 555 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 PRPF4BQ13523 1007 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 DNASE1L3Q13609 305 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GPR162Q16538 588 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CD300EQ496F6 205 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 C1QL3Q5VWW1 255 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GRHL2Q6ISB3 625 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CDC73Q6P1J9 531 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GALNTL5Q7Z4T8 443 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CAND1Q86VP6 1230 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 MON1AQ86VX9 555 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 P3H2Q8IVL5 708 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 GSPT2Q8IYD1 628 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM132CQ8N3T6 1108 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 D2HGDHQ8N465 521 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 WDTC1Q8N5D0 677 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 FRMD1Q8N878 549 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ENDOVQ8N8Q3 282 aaKnown RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 NEK9Q8TD19 979 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 AFAP1L1Q8TED9 768 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 WDYHV1Q96HA8 205 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CCDC34Q96HJ3 373 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 LRRC37BQ96QE4 947 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 ZSWIM1Q9BR11 485 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 DPCDQ9BVM2 203 aaPredicted RBP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 FTOQ9C0B1 505 aaKnown RBP eCLIP4.78□□□□□ -1.64
GTF3A-208ENST00000493903 INTS13Q9NVM9 706 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 CEP72Q9P209 647 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 SLC30A1Q9Y6M5 507 aa4.78□□□□□ -1.64
GTF3A-208ENST00000493903 A1L4Q6 167 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CLGNO14967 610 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 RAD17O75943 681 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 BAG2O95816 211 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 C1SP09871 688 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 EEF1DP29692 281 aaKnown RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ICAM3P32942 547 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 HNF1BP35680 557 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CPOXP36551 454 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 DPP6P42658 865 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CTCFP49711 727 aaPredicted RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 RPS6KA3P51812 740 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 RABGGTBP53611 331 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 EPHB4P54760 987 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CXADRP78310 365 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 EIF2B5Q13144 721 aaKnown RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 SLC9B1Q4ZJI4 515 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 FBLN7Q53RD9 439 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 RAB41Q5JT25 222 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TEDDM1Q5T9Z0 273 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ARMC6Q6NXE6 501 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 LRRC55Q6ZSA7 311 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ADGRA1Q86SQ6 560 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TAX1BP1Q86VP1 789 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 LGI4Q8N135 537 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CNTROBQ8N137 903 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 SYT8Q8NBV8 401 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 KCTD6Q8NC69 237 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 BEND2Q8NDZ0 799 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CLEC4CQ8WTT0 213 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 NCSTNQ92542 709 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 GLG1Q92896 1179 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TMEM125Q96AQ2 219 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 FAM149B1Q96BN6 582 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CTHRC1Q96CG8 243 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 KLHL29Q96CT2 875 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 PERPQ96FX8 193 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 MAP7D2Q96T17 732 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 PIP5K1AQ99755 562 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 NPLQ9BXD5 320 aaPredicted RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TEX12Q9BXU0 123 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ACTRT3Q9BYD9 372 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TPSD1Q9BZJ3 242 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 SIL1Q9H173 461 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TTYH1Q9H313 450 aaPredicted RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 CDCP1Q9H5V8 836 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 KAT14Q9H8E8 782 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ERVMER34-1Q9H9K5 563 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 SLC35C2Q9NQQ7 365 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 PCDHB16Q9NRJ7 776 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 TMEM74BQ9NUR3 256 aa4.77□□□□□ -1.65
GTF3A-208ENST00000493903 MARCH4Q9P2E8 410 aaPredicted RBP4.77□□□□□ -1.65
GTF3A-208ENST00000493903 ZNF70Q9UC06 446 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms