RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM189-UBE2V1I3L0A0 370 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 M0QZQ0 153 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TACC1O75410 805 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 CRTAMO95727 393 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 NTRK1P04629 796 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SERPING1P05155 500 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 MPOP05164 745 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 FAM163BP0C2L3 166 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 WARSP23381 471 aaKnown RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 PAX3P23760 479 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 PRKCIP41743 596 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ALDH7A1P49419 539 aaKnown RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 AARSP49588 968 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ZNF132P52740 706 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 NDST1P52848 882 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 RABGGTBP53611 331 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ERVFRD-1P60508 538 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 YWHAEP62258 255 aaKnown RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 CDK17Q00537 523 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 KLHL30Q0D2K2 578 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 INCA1Q0VD86 236 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 MTF1Q14872 753 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 FNDC3BQ53EP0 1204 aaKnown RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TRIM61Q5EBN2 209 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SPOUT1Q5T280 376 aaKnown RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 RAD9BQ6WBX8 426 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ZNF571Q7Z3V5 609 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SLC47A2Q86VL8 602 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM173Q86WV6 379 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TMTC1Q8IUR5 882 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 LRRC43Q8N309 656 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SYNPOQ8N3V7 929 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 COLGALT1Q8NBJ5 622 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SLC4A11Q8NBS3 891 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 APPL2Q8NEU8 664 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 OR6B3Q8NGW1 331 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 OLIG1Q8TAK6 271 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SLC20A1Q8WUM9 679 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TFAP2BQ92481 460 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ZSWIM1Q9BR11 485 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM175Q9BSA9 504 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 SNX25Q9H3E2 840 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 HAUS4Q9H6D7 363 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 NHEJ1Q9H9Q4 299 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 MARCH5Q9NX47 278 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 ADAM28Q9UKQ2 775 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 BARX2Q9UMQ3 279 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 COA3Q9Y2R0 106 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 INSL6Q9Y581 213 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRA2B-216ENST00000493864 A0A0C4DFX4 3053 aa6.94□□□□□ -1.3
TRA2B-216ENST00000493864 MYO7AQ13402 2215 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 UNC80Q8N2C7 3258 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 KIAA1671Q9BY89 1806 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 FAM170AA1A519 330 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 OR14I1A6ND48 311 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 A8MXQ7 604 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 H7BY64 318 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 GABRDO14764 452 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TRAPPC3O43617 180 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ATP2C2O75185 946 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 RASGRP1O95267 797 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 SOD2P04179 222 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 DBHP09172 617 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 CCDC172P0C7W6 258 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 GLI4P10075 376 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ODC1P11926 461 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 MYOGP15173 224 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 CYP11B1P15538 503 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TNFAIP3P21580 790 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ACAT1P24752 427 aaKnown RBP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 GRK2P25098 689 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TKTP29401 623 aaKnown RBP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 GRK3P35626 688 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 CDR1P51861 262 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 BPIFB4P59827 614 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ASTE1Q2TB18 679 aaPredicted RBP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TDRD12Q587J7 1177 aaKnown RBP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 FAM171A1Q5VUB5 890 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TAF3Q5VWG9 929 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 FUT10Q6P4F1 479 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 FGD2Q7Z6J4 655 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ACOT1Q86TX2 421 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 METTL23Q86XA0 190 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 ADGRF2Q8IZF7 708 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 CRYBG2Q8N1P7 616 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 SLC39A11Q8N1S5 342 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TTC39CQ8N584 583 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 C12orf29Q8N999 325 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 CCDC112Q8NEF3 446 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
TRA2B-216ENST00000493864 TMEM176AQ96HP8 235 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 IGSF21Q96ID5 467 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 B3GALT6Q96L58 329 aa6.93□□□□□ -1.3
TRA2B-216ENST00000493864 MAGEB10Q96LZ2 347 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms